RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 LIMK1P53667 647 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 MAP3K7CLP57077 242 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 KDSRQ06136 332 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 LY6G5CQ5SRR4 150 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 IL31Q6EBC2 164 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 ANO7Q6IWH7 933 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 C12orf29Q8N999 325 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 IMPG2Q9BZV3 1241 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 NACA2Q9H009 215 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 FBXO44Q9H4M3 255 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 CSNK1G1Q9HCP0 422 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 ARHGEF4Q9NR80 690 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 RXFP3Q9NSD7 469 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 INVSQ9Y283 1065 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 LAMA1P25391 3075 aa19.56■□□□□ 0.72
SREBF1-206ENST00000423161 CEP192Q8TEP8 1941 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 FAM237AA0A1B0GTK4 181 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-206ENST00000423161 ADRB1P08588 477 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 TRIM49P0CI25 452 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 TRIM49CP0CI26 452 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 IRF1P10914 325 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 KCNA4P22459 653 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 ADORA2BP29275 332 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 TIE1P35590 1138 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 DPYDQ12882 1025 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 CRY1Q16526 586 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 NFIL3Q16649 462 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 USP39Q53GS9 565 aaKnown RBP19.55■□□□□ 0.72
SREBF1-206ENST00000423161 RASSF3Q86WH2 238 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 ALLCQ8N6M5 410 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 DDX1Q92499 740 aaKnown RBP19.55■□□□□ 0.72
SREBF1-206ENST00000423161 CNOT6LQ96LI5 555 aaKnown RBP19.55■□□□□ 0.72
SREBF1-206ENST00000423161 VPS45Q9NRW7 570 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 MAPK8IP1Q9UQF2 711 aa19.55■□□□□ 0.72
SREBF1-206ENST00000423161 TNRC6BQ9UPQ9 1833 aaKnown RBP19.54■□□□□ 0.72
SREBF1-206ENST00000423161 TLR5O60602 858 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 KLF8O95600 359 aaPredicted RBP19.54■□□□□ 0.72
SREBF1-206ENST00000423161 FAM200BP0CF97 657 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 KRT13P13646 458 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 GRIA2P42262 883 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 GCLMP48507 274 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 CREB5Q02930 508 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 GAD2Q05329 585 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 INCA1Q0VD86 236 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 INTS8Q75QN2 995 aaKnown RBP19.54■□□□□ 0.72
SREBF1-206ENST00000423161 TTC30AQ86WT1 665 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 BBS7Q8IWZ6 715 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 FAM186BQ8IYM0 893 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 IL17RCQ8NAC3 791 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 TXNDC5Q8NBS9 432 aaKnown RBP19.54■□□□□ 0.72
SREBF1-206ENST00000423161 MDGA1Q8NFP4 955 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 WBP2Q969T9 261 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 MMRN2Q9H8L6 949 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 TLR8Q9NR97 1041 aaKnown RBP19.54■□□□□ 0.72
SREBF1-206ENST00000423161 ACACBO00763 2458 aa19.54■□□□□ 0.72
SREBF1-206ENST00000423161 ALDH1A2O94788 518 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 CHRM1P11229 460 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-206ENST00000423161 HNRNPLP14866 589 aaKnown RBP eCLIP19.53■□□□□ 0.72
SREBF1-206ENST00000423161 PGFP49763 221 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 PPP3CAQ08209 521 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 HSF5Q4G112 596 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-206ENST00000423161 STPG1Q5TH74 334 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 EMC10Q5UCC4 262 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 BTBD8Q5XKL5 378 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 PMS2CLQ68D20 193 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 TCEAL6Q6IPX3 200 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 TMEM92Q6UXU6 159 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 KRBA2Q6ZNG9 492 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 CLEC20AQ6ZU45 233 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 GPRIN1Q7Z2K8 1008 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 C11orf74Q86VG3 221 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 PHTF2Q8N3S3 785 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 GUF1Q8N442 669 aaKnown RBP19.53■□□□□ 0.72
SREBF1-206ENST00000423161 NAT16Q8N8M0 369 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 TAS1R2Q8TE23 839 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 TCEAL3Q969E4 200 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 JAKMIP2Q96AA8 810 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 CNTNAP3BQ96NU0 1288 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 TWNKQ96RR1 684 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 HNRNPABQ99729 332 aaKnown RBP19.53■□□□□ 0.72
SREBF1-206ENST00000423161 DUSP9Q99956 384 aaKnown RBP19.53■□□□□ 0.72
SREBF1-206ENST00000423161 CNTNAP3Q9BZ76 1288 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 NIF3L1Q9GZT8 377 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 SCAND2PQ9GZW5 306 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-206ENST00000423161 GOLPH3LQ9H4A5 285 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 CYP3A43Q9HB55 503 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 APOBEC3GQ9HC16 384 aaKnown RBP19.53■□□□□ 0.72
SREBF1-206ENST00000423161 SPHK2Q9NRA0 654 aa19.53■□□□□ 0.72
SREBF1-206ENST00000423161 PI4KAP42356 2102 aa19.52■□□□□ 0.72
SREBF1-206ENST00000423161 A0A0A0MRY4 1105 aa19.52■□□□□ 0.72
SREBF1-206ENST00000423161 A0A1W2PQ27 194 aa19.52■□□□□ 0.72
SREBF1-206ENST00000423161 A0A1W2PQ64 194 aa19.52■□□□□ 0.72
SREBF1-206ENST00000423161 A0A1W2PQD8 194 aa19.52■□□□□ 0.72
SREBF1-206ENST00000423161 BCLAF3A2AJT9 711 aaKnown RBP19.52■□□□□ 0.72
SREBF1-206ENST00000423161 SGK1O00141 431 aa19.52■□□□□ 0.72
SREBF1-206ENST00000423161 HOXC11O43248 304 aaPredicted RBP19.52■□□□□ 0.72
SREBF1-206ENST00000423161 RPL13P26373 211 aaKnown RBP19.52■□□□□ 0.72
SREBF1-206ENST00000423161 TNFRSF4P43489 277 aa19.52■□□□□ 0.72
SREBF1-206ENST00000423161 KIR2DL1P43626 348 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms