RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 SLC28A3Q9HAS3 691 aa17.04■□□□□ 0.32
CBX6-202ENST00000407418 EVPLLA8MZ36 301 aa17.04■□□□□ 0.32
CBX6-202ENST00000407418 ANKRD23Q86SG2 305 aa17.04■□□□□ 0.32
CBX6-202ENST00000407418 GRAMD1AQ96CP6 724 aa17.04■□□□□ 0.32
CBX6-202ENST00000407418 SKP1P63208 163 aa17.04■□□□□ 0.32
CBX6-202ENST00000407418 PCBP1Q15365 356 aaKnown RBP eCLIP17.04■□□□□ 0.32
CBX6-202ENST00000407418 SMPD4Q9NXE4 827 aa17.04■□□□□ 0.32
CBX6-202ENST00000407418 VPS51Q9UID3 782 aa17.04■□□□□ 0.32
CBX6-202ENST00000407418 AP4E1Q9UPM8 1137 aa17.04■□□□□ 0.32
CBX6-202ENST00000407418 KIAA1210Q9ULL0 1709 aa17.04■□□□□ 0.32
CBX6-202ENST00000407418 GLTPD2A6NH11 291 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 PDZK1P1A8MUH7 402 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 STIP1P31948 543 aaKnown RBP17.03■□□□□ 0.32
CBX6-202ENST00000407418 C21orf59P57076 290 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 KCNK10P57789 538 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 TADA1Q96BN2 335 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 ATP13A1Q9HD20 1204 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 NT5MQ9NPB1 228 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 AMACRQ9UHK6 382 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 FZD1Q9UP38 647 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 A0A1B0GTH6 734 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 HSPA9P38646 679 aaKnown RBP17.03■□□□□ 0.32
CBX6-202ENST00000407418 THOP1P52888 689 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 PTPN11Q06124 597 aaPredicted RBP17.03■□□□□ 0.32
CBX6-202ENST00000407418 STX3Q13277 289 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 CAMKK2Q96RR4 588 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 RWDD3Q9Y3V2 267 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 IRF6O14896 467 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 TGM2P21980 687 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 GPC1P35052 558 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 CHI3L1P36222 383 aaPredicted RBP17.03■□□□□ 0.32
CBX6-202ENST00000407418 GIT2Q14161 759 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 TMA16Q96EY4 203 aaKnown RBP17.03■□□□□ 0.32
CBX6-202ENST00000407418 RANBP17Q9H2T7 1088 aaKnown RBP17.03■□□□□ 0.32
CBX6-202ENST00000407418 NDOR1Q9UHB4 597 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 NCAM2O15394 837 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 FKBP9O95302 570 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 PTPN7P35236 360 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 MYL6P60660 151 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 PPIGQ13427 754 aaKnown RBP eCLIP17.03■□□□□ 0.32
CBX6-202ENST00000407418 APOBEC3HQ6NTF7 200 aaKnown RBP17.03■□□□□ 0.32
CBX6-202ENST00000407418 KIAA1324Q6UXG2 1013 aaKnown RBP17.03■□□□□ 0.32
CBX6-202ENST00000407418 FKBP9P1Q75LS8 142 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 TRMT11Q7Z4G4 463 aaKnown RBP17.03■□□□□ 0.32
CBX6-202ENST00000407418 CCNJLQ8IV13 435 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 FICDQ9BVA6 458 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 RAMP2O60895 175 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 PGK1P00558 417 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 PCYT1AP49585 367 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 C16orf72Q14CZ0 275 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 PCYOX1LQ8NBM8 494 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 MRIQ9BWK5 157 aa17.03■□□□□ 0.32
CBX6-202ENST00000407418 MRPL1Q9BYD6 325 aaKnown RBP17.03■□□□□ 0.32
CBX6-202ENST00000407418 IQGAP1P46940 1657 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 POLR2LP62875 67 aaKnown RBP17.02■□□□□ 0.32
CBX6-202ENST00000407418 CNTN2Q02246 1040 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 FBXO22Q8NEZ5 403 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 LPCAT1Q8NF37 534 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 CXorf40AQ8TE69 158 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 RPTORQ8N122 1335 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 SNRPAP09012 282 aaKnown RBP17.02■□□□□ 0.32
CBX6-202ENST00000407418 PCNAP12004 261 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 BLVRAP53004 296 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 CDC16Q13042 620 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 LGI2Q8N0V4 545 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 MCOLN3Q8TDD5 553 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 RBBP8Q99708 897 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 CCDC90BQ9GZT6 254 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 GAKO14976 1311 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 ACKR2O00590 384 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 ARHGEF9O43307 516 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 USP41Q3LFD5 358 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 NOMO2Q5JPE7 1267 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 HLA-DQA1Q5Y7H0 255 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 BTN2A2Q8WVV5 523 aa17.02■□□□□ 0.32
CBX6-202ENST00000407418 F8W810 466 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 CYP2A7P20853 494 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 GRK4P32298 578 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 SCNN1BP51168 640 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 ZNF555Q8NEP9 628 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 CISHQ9NSE2 258 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 GID8Q9NWU2 228 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 GTF3C4Q9UKN8 822 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 POLR1AO95602 1720 aaPredicted RBP17.02■□□□□ 0.31
CBX6-202ENST00000407418 MEI4A8MW99 385 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 TRIM16O95361 564 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 FGFR1P11362 822 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 OR1E1P30953 314 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 AP2B1P63010 937 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 C3orf67Q6ZVT6 689 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 FAM9CQ8IZT9 166 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 CAPNS2Q96L46 248 aa17.02■□□□□ 0.31
CBX6-202ENST00000407418 RFX3P48380 749 aa17.01■□□□□ 0.31
CBX6-202ENST00000407418 DMC1Q14565 340 aa17.01■□□□□ 0.31
CBX6-202ENST00000407418 HORMAD1Q86X24 394 aa17.01■□□□□ 0.31
CBX6-202ENST00000407418 MLXIPLQ9NP71 852 aa17.01■□□□□ 0.31
CBX6-202ENST00000407418 KCNQ5Q9NR82 932 aa17.01■□□□□ 0.31
CBX6-202ENST00000407418 WARS2Q9UGM6 360 aaKnown RBP17.01■□□□□ 0.31
CBX6-202ENST00000407418 CSDE1O75534 798 aaKnown RBP17.01■□□□□ 0.31
CBX6-202ENST00000407418 ACTN3Q08043 901 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms