RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 WDR49Q8IV35 697 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 NPAS3Q8IXF0 933 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 TMEFF1Q8IYR6 380 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 PPM1KQ8N3J5 372 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 LINC01465Q8N7H1 131 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 ACTRT1Q8TDG2 376 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 PRPF31Q8WWY3 499 aaKnown RBP8.71□□□□□ -1.02
CD44-205ENST00000352818 ZNF516Q92618 1163 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 KAT5Q92993 513 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 ZC3H10Q96K80 434 aaKnown RBP8.71□□□□□ -1.02
CD44-205ENST00000352818 ACO2Q99798 780 aaKnown RBP8.71□□□□□ -1.02
CD44-205ENST00000352818 RHOXF2Q9BQY4 288 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 TARS2Q9BW92 718 aaKnown RBP8.71□□□□□ -1.02
CD44-205ENST00000352818 FZD8Q9H461 694 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 CCDC86Q9H6F5 360 aaKnown RBP8.71□□□□□ -1.02
CD44-205ENST00000352818 ZDHHC7Q9NXF8 308 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 RBAKQ9NYW8 714 aaPredicted RBP8.71□□□□□ -1.02
CD44-205ENST00000352818 TMEM59LQ9UK28 342 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 TTC7AQ9ULT0 858 aaPredicted RBP8.71□□□□□ -1.02
CD44-205ENST00000352818 CNTN6Q9UQ52 1028 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 KAT6AQ92794 2004 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 COL4A2P08572 1712 aa8.71□□□□□ -1.02
CD44-205ENST00000352818 MAGEB2O15479 319 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 CLDN3O15551 220 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 RPP40O75818 363 aaKnown RBP8.7□□□□□ -1.02
CD44-205ENST00000352818 VNN1O95497 513 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 DLATP10515 647 aaKnown RBP8.7□□□□□ -1.02
CD44-205ENST00000352818 CYP11B1P15538 503 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 FCARP24071 287 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 TBXAS1P24557 533 aaPredicted RBP8.7□□□□□ -1.02
CD44-205ENST00000352818 PIK3CAP42336 1068 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 NOP2P46087 812 aaKnown RBP8.7□□□□□ -1.02
CD44-205ENST00000352818 AFF1P51825 1210 aaKnown RBP8.7□□□□□ -1.02
CD44-205ENST00000352818 CRYBB1P53674 252 aaPredicted RBP8.7□□□□□ -1.02
CD44-205ENST00000352818 PTENP60484 403 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 FMO1Q01740 532 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 C2orf54Q08AI8 447 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 DRP2Q13474 957 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 MAPK6Q16659 721 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 PLK5Q496M5 336 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 TDRD10Q5VZ19 366 aaKnown RBP8.7□□□□□ -1.02
CD44-205ENST00000352818 TANGO2Q6ICL3 276 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 MPZL3Q6UWV2 235 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 CCNI2Q6ZMN8 369 aaPredicted RBP8.7□□□□□ -1.02
CD44-205ENST00000352818 TRIM72Q6ZMU5 477 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 PEX26Q7Z412 305 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 NT5DC3Q86UY8 548 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 PALB2Q86YC2 1186 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 RNF168Q8IYW5 571 aaPredicted RBP8.7□□□□□ -1.02
CD44-205ENST00000352818 RASGEF1CQ8N431 466 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 HDAC7Q8WUI4 952 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 SLC20A1Q8WUM9 679 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 FAM3CQ92520 227 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 DNASE1L2Q92874 299 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 LPPQ93052 612 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 HES6Q96HZ4 224 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 FAXDC2Q96IV6 333 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 ZBTB45Q96K62 511 aaPredicted RBP8.7□□□□□ -1.02
CD44-205ENST00000352818 SELENOOQ9BVL4 669 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 FUT8Q9BYC5 575 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 MRPL9Q9BYD2 267 aaKnown RBP8.7□□□□□ -1.02
CD44-205ENST00000352818 UBXN6Q9BZV1 441 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 DUSP15Q9H1R2 295 aaPredicted RBP8.7□□□□□ -1.02
CD44-205ENST00000352818 PTPRHQ9HD43 1115 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 TMEM9BQ9NQ34 198 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 MRPL17Q9NRX2 175 aaKnown RBP8.7□□□□□ -1.02
CD44-205ENST00000352818 MARCH5Q9NX47 278 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 GTF3C4Q9UKN8 822 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 AMFRQ9UKV5 643 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 L1RE1Q9UN81 338 aa8.7□□□□□ -1.02
CD44-205ENST00000352818 SPAG17Q6Q759 2223 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 A0A087WV48 116 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 BCLAF3A2AJT9 711 aaKnown RBP8.69□□□□□ -1.02
CD44-205ENST00000352818 MIF4GDA9UHW6 222 aaKnown RBP8.69□□□□□ -1.02
CD44-205ENST00000352818 PATE3B3GLJ2 98 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 ACKR2O00590 384 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 MAN2B1O00754 1011 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 ECI2O75521 394 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 ZMYND10O75800 440 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 DDHD2O94830 711 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 SEC31AO94979 1220 aaKnown RBP8.69□□□□□ -1.02
CD44-205ENST00000352818 FTLP02792 175 aaPredicted RBP8.69□□□□□ -1.02
CD44-205ENST00000352818 CYP1A2P05177 515 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 ADH1AP07327 375 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 CLTAP09496 248 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 TNNI1P19237 187 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 ACO1P21399 889 aaKnown RBP8.69□□□□□ -1.02
CD44-205ENST00000352818 PHKA2P46019 1235 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 WNT7BP56706 349 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 TNNC1P63316 161 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 MBTD1Q05BQ5 628 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 CLEC16AQ2KHT3 1053 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 HDXQ7Z353 690 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 DAAM2Q86T65 1068 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 UBR7Q8N806 425 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 EIF1ADQ8N9N8 165 aaKnown RBP8.69□□□□□ -1.02
CD44-205ENST00000352818 RNF149Q8NC42 400 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 SLC35G2Q8TBE7 412 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 TATDN2Q93075 761 aa8.69□□□□□ -1.02
CD44-205ENST00000352818 ARHGEF26Q96DR7 871 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms