RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SCAF11Q99590 1463 aaKnown RBP16.06■□□□□ 0.16
TRAPPC9-208ENST00000520857 NUTM2DQ5VT03 806 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC9-208ENST00000520857 DDX19BQ9UMR2 479 aa16.06■□□□□ 0.16
TRAPPC9-208ENST00000520857 MSNP26038 577 aaKnown RBP16.05■□□□□ 0.16
TRAPPC9-208ENST00000520857 EIF4G3O43432 1585 aaKnown RBP16.05■□□□□ 0.16
TRAPPC9-208ENST00000520857 ANKRD45Q5TZF3 282 aa16.05■□□□□ 0.16
TRAPPC9-208ENST00000520857 DDX49Q9Y6V7 483 aaKnown RBP16.05■□□□□ 0.16
TRAPPC9-208ENST00000520857 PRDM15P57071 1507 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC9-208ENST00000520857 NUP160Q12769 1436 aa16.05■□□□□ 0.16
TRAPPC9-208ENST00000520857 WDR63Q8IWG1 891 aa16.04■□□□□ 0.16
TRAPPC9-208ENST00000520857 ABCC10Q5T3U5 1492 aa16.04■□□□□ 0.16
TRAPPC9-208ENST00000520857 TMEM132EQ6IEE7 984 aa16.04■□□□□ 0.16
TRAPPC9-208ENST00000520857 SYCP2Q9BX26 1530 aa16.04■□□□□ 0.16
TRAPPC9-208ENST00000520857 CROCC2H7BZ55 1655 aa16.03■□□□□ 0.16
TRAPPC9-208ENST00000520857 TNPO1Q92973 898 aaKnown RBP16.03■□□□□ 0.16
TRAPPC9-208ENST00000520857 ZMYND15Q9H091 742 aa16.03■□□□□ 0.16
TRAPPC9-208ENST00000520857 NOB1Q9ULX3 412 aaKnown RBP16.03■□□□□ 0.16
TRAPPC9-208ENST00000520857 KANK1Q14678 1352 aa16.02■□□□□ 0.16
TRAPPC9-208ENST00000520857 ZBTB7CA1YPR0 619 aa16.02■□□□□ 0.16
TRAPPC9-208ENST00000520857 NSD3Q9BZ95 1437 aa16.02■□□□□ 0.16
TRAPPC9-208ENST00000520857 FSD2A1L4K1 749 aa16.02■□□□□ 0.15
TRAPPC9-208ENST00000520857 ADGRF5Q8IZF2 1346 aa16.02■□□□□ 0.15
TRAPPC9-208ENST00000520857 IPO8O15397 1037 aaKnown RBP16.01■□□□□ 0.15
TRAPPC9-208ENST00000520857 RRP9O43818 475 aaKnown RBP16.01■□□□□ 0.15
TRAPPC9-208ENST00000520857 TRIM27P14373 513 aa16.01■□□□□ 0.15
TRAPPC9-208ENST00000520857 ELL2O00472 640 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC9-208ENST00000520857 SSH1Q8WYL5 1049 aa16.01■□□□□ 0.15
TRAPPC9-208ENST00000520857 EIF2AK4Q9P2K8 1649 aaKnown RBP16.01■□□□□ 0.15
TRAPPC9-208ENST00000520857 TMEM57Q8N5G2 664 aa16■□□□□ 0.15
TRAPPC9-208ENST00000520857 C1orf115Q9H7X2 142 aa16■□□□□ 0.15
TRAPPC9-208ENST00000520857 ATF7IPQ6VMQ6 1270 aa16■□□□□ 0.15
TRAPPC9-208ENST00000520857 NASPP49321 788 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC9-208ENST00000520857 SKOR2Q2VWA4 1001 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC9-208ENST00000520857 CDC42BPAQ5VT25 1732 aa15.99■□□□□ 0.15
TRAPPC9-208ENST00000520857 APBB1O00213 710 aa15.99■□□□□ 0.15
TRAPPC9-208ENST00000520857 STK26Q9P289 416 aa15.98■□□□□ 0.15
TRAPPC9-208ENST00000520857 SRPK2P78362 688 aaKnown RBP15.98■□□□□ 0.15
TRAPPC9-208ENST00000520857 STAC3Q96MF2 364 aa15.98■□□□□ 0.15
TRAPPC9-208ENST00000520857 RIPK4P57078 832 aa15.97■□□□□ 0.15
TRAPPC9-208ENST00000520857 KIAA1211Q6ZU35 1233 aa15.97■□□□□ 0.15
TRAPPC9-208ENST00000520857 RBM10P98175 930 aaKnown RBP15.97■□□□□ 0.15
TRAPPC9-208ENST00000520857 TPRNQ4KMQ1 711 aa15.97■□□□□ 0.15
TRAPPC9-208ENST00000520857 GGNBP2Q9H3C7 697 aa15.97■□□□□ 0.15
TRAPPC9-208ENST00000520857 CALD1Q05682 793 aaKnown RBP15.97■□□□□ 0.15
TRAPPC9-208ENST00000520857 FOXD4L5Q5VV16 416 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC9-208ENST00000520857 FOXD4L4Q8WXT5 416 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC9-208ENST00000520857 SCAPERQ9BY12 1400 aa15.96■□□□□ 0.15
TRAPPC9-208ENST00000520857 NPC1L1Q9UHC9 1359 aa15.96■□□□□ 0.15
TRAPPC9-208ENST00000520857 GAS2L3Q86XJ1 694 aa15.96■□□□□ 0.15
TRAPPC9-208ENST00000520857 RBM42Q9BTD8 480 aaKnown RBP15.96■□□□□ 0.15
TRAPPC9-208ENST00000520857 POLR3AO14802 1390 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC9-208ENST00000520857 SSFA2P28290 1259 aa15.95■□□□□ 0.14
TRAPPC9-208ENST00000520857 MCTP1Q6DN14 999 aa15.95■□□□□ 0.14
TRAPPC9-208ENST00000520857 FAM13BQ9NYF5 915 aa15.95■□□□□ 0.14
TRAPPC9-208ENST00000520857 ADCY10Q96PN6 1610 aa15.95■□□□□ 0.14
TRAPPC9-208ENST00000520857 ABCC2Q92887 1545 aa15.94■□□□□ 0.14
TRAPPC9-208ENST00000520857 CHD1LQ86WJ1 897 aa15.94■□□□□ 0.14
TRAPPC9-208ENST00000520857 GGT6Q6P531 493 aa15.94■□□□□ 0.14
TRAPPC9-208ENST00000520857 CABP2Q9NPB3 220 aa15.94■□□□□ 0.14
TRAPPC9-208ENST00000520857 ISY1Q9ULR0 285 aaKnown RBP15.94■□□□□ 0.14
TRAPPC9-208ENST00000520857 ERBB4Q15303 1308 aa15.94■□□□□ 0.14
TRAPPC9-208ENST00000520857 PTMSP20962 102 aa15.93■□□□□ 0.14
TRAPPC9-208ENST00000520857 CAVIN1Q6NZI2 390 aaKnown RBP15.93■□□□□ 0.14
TRAPPC9-208ENST00000520857 PTMAP06454 111 aaKnown RBP15.93■□□□□ 0.14
TRAPPC9-208ENST00000520857 R3HCC1Q9Y3T6 440 aaKnown RBP15.93■□□□□ 0.14
TRAPPC9-208ENST00000520857 K7ELQ4 463 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC9-208ENST00000520857 SAMD9LQ8IVG5 1584 aa15.92■□□□□ 0.14
TRAPPC9-208ENST00000520857 ARHGEF5Q12774 1597 aa15.92■□□□□ 0.14
TRAPPC9-208ENST00000520857 TMPOP42166 694 aaKnown RBP15.91■□□□□ 0.14
TRAPPC9-208ENST00000520857 HDAC1Q13547 482 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC9-208ENST00000520857 CIZ1Q9ULV3 898 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC9-208ENST00000520857 KIF16BQ96L93 1317 aa15.91■□□□□ 0.14
TRAPPC9-208ENST00000520857 CCDC173Q0VFZ6 552 aa15.91■□□□□ 0.14
TRAPPC9-208ENST00000520857 NLRP1Q9C000 1473 aa15.9■□□□□ 0.14
TRAPPC9-208ENST00000520857 TPM2P07951 284 aa15.9■□□□□ 0.14
TRAPPC9-208ENST00000520857 DNTTIP2Q5QJE6 756 aaKnown RBP15.89■□□□□ 0.13
TRAPPC9-208ENST00000520857 SMC5Q8IY18 1101 aa15.89■□□□□ 0.13
TRAPPC9-208ENST00000520857 SYNMO15061 1565 aa15.89■□□□□ 0.13
TRAPPC9-208ENST00000520857 ZSCAN30Q86W11 494 aa15.88■□□□□ 0.13
TRAPPC9-208ENST00000520857 RAB3GAP1Q15042 981 aa15.88■□□□□ 0.13
TRAPPC9-208ENST00000520857 DUOX2Q9NRD8 1548 aa15.88■□□□□ 0.13
TRAPPC9-208ENST00000520857 GAS2L2Q8NHY3 880 aa15.87■□□□□ 0.13
TRAPPC9-208ENST00000520857 EVC2Q86UK5 1308 aa15.87■□□□□ 0.13
TRAPPC9-208ENST00000520857 CLASP1Q7Z460 1538 aa15.87■□□□□ 0.13
TRAPPC9-208ENST00000520857 NUCB1Q02818 461 aa15.87■□□□□ 0.13
TRAPPC9-208ENST00000520857 TBC1D9Q6ZT07 1266 aa15.87■□□□□ 0.13
TRAPPC9-208ENST00000520857 ABCA8O94911 1581 aa15.87■□□□□ 0.13
TRAPPC9-208ENST00000520857 CD2BP2O95400 341 aaKnown RBP15.87■□□□□ 0.13
TRAPPC9-208ENST00000520857 FOXD4L6Q3SYB3 417 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC9-208ENST00000520857 FOXD4L3Q6VB84 417 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC9-208ENST00000520857 CCDC27Q2M243 656 aa15.86■□□□□ 0.13
TRAPPC9-208ENST00000520857 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.86■□□□□ 0.13
TRAPPC9-208ENST00000520857 NOL8Q76FK4 1167 aaKnown RBP15.86■□□□□ 0.13
TRAPPC9-208ENST00000520857 CT47B1P0C2W7 299 aaPredicted RBP15.86■□□□□ 0.13
TRAPPC9-208ENST00000520857 SNX21Q969T3 373 aa15.86■□□□□ 0.13
TRAPPC9-208ENST00000520857 THUMPD2Q9BTF0 503 aaKnown RBP15.86■□□□□ 0.13
TRAPPC9-208ENST00000520857 CHMP4BQ9H444 224 aaKnown RBP15.86■□□□□ 0.13
TRAPPC9-208ENST00000520857 ZBTB40Q9NUA8 1239 aa15.86■□□□□ 0.13
TRAPPC9-208ENST00000520857 RNF214Q8ND24 703 aa15.86■□□□□ 0.13
TRAPPC9-208ENST00000520857 TRAPPC8Q9Y2L5 1435 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms