RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W YRA2P36036 203 aaKnown RBP RIP-Chip data4.11□□□□□ -1.75not detected
RPN7YPR108W YDR381C-AQ3E6R5 114 aa4.11□□□□□ -1.75
RPN7YPR108W YLL066W-BQ8TGJ7 56 aa4.11□□□□□ -1.75
RPN7YPR108W YER175W-AQ8TGU4 54 aa4.11□□□□□ -1.75
RPN7YPR108W YDR034C-AP0C289 58 aa4.1□□□□□ -1.75
RPN7YPR108W YGR039WP53225 103 aa4.1□□□□□ -1.75
RPN7YPR108W MPC3P53311 146 aa4.1□□□□□ -1.75
RPN7YPR108W YNL162W-AQ3E7A8 72 aa4.1□□□□□ -1.75
RPN7YPR108W DDR2P89113 61 aa4.09□□□□□ -1.75
RPN7YPR108W YBR230W-AQ3E762 66 aa4.09□□□□□ -1.75
RPN7YPR108W EDC2P40023 145 aaPredicted RBP4.08□□□□□ -1.76
RPN7YPR108W YOR034C-AQ3E735 80 aa4.08□□□□□ -1.76
RPN7YPR108W RRT15Q3E811 62 aa4.08□□□□□ -1.76
RPN7YPR108W RPL36BO14455 100 aaKnown RBP4.07□□□□□ -1.76
RPN7YPR108W YBL081WP38180 368 aaKnown RBP4.07□□□□□ -1.76
RPN7YPR108W AUA1P32450 94 aa4.06□□□□□ -1.76
RPN7YPR108W YGL193CP53097 103 aa4.06□□□□□ -1.76
RPN7YPR108W ATP20Q12233 115 aa4.06□□□□□ -1.76
RPN7YPR108W YLR285C-AQ3E771 56 aa4.06□□□□□ -1.76
RPN7YPR108W YCR050CP25630 102 aa4.05□□□□□ -1.76
RPN7YPR108W RPL38P49167 78 aaKnown RBP4.05□□□□□ -1.76
RPN7YPR108W YOR072WQ08486 104 aa4.05□□□□□ -1.76
RPN7YPR108W YLR307C-AQ3E825 87 aa4.05□□□□□ -1.76
RPN7YPR108W HOT13P36078 116 aa4.04□□□□□ -1.76
RPN7YPR108W SMP1P38128 452 aa4.04□□□□□ -1.76
RPN7YPR108W PEX22P39718 180 aa4.04□□□□□ -1.76
RPN7YPR108W LCL1Q02786 101 aa4.04□□□□□ -1.76
RPN7YPR108W YGR121W-AQ3E816 71 aa4.04□□□□□ -1.76
RPN7YPR108W COX23P38824 151 aa4.03□□□□□ -1.76
RPN7YPR108W ICS3P47034 131 aa4.03□□□□□ -1.76
RPN7YPR108W SPG1P50088 95 aa4.03□□□□□ -1.76
RPN7YPR108W YFR009W-AP0C5M9 85 aa4.02□□□□□ -1.77
RPN7YPR108W YPL038W-AQ3E7B4 63 aa4.02□□□□□ -1.77
RPN7YPR108W GAT4P40569 121 aa4.01□□□□□ -1.77
RPN7YPR108W IGD1P43598 195 aa4.01□□□□□ -1.77
RPN7YPR108W YOR314WQ12506 109 aa4.01□□□□□ -1.77
RPN7YPR108W YHR213W-BQ8TGK1 99 aa4.01□□□□□ -1.77
RPN7YPR108W YLR156WP0CE96 114 aa4□□□□□ -1.77
RPN7YPR108W YLR159WP0CE97 114 aa4□□□□□ -1.77
RPN7YPR108W YLR161WP0CE98 114 aa4□□□□□ -1.77
RPN7YPR108W YLR157W-DP0CE99 70 aa4□□□□□ -1.77
RPN7YPR108W TOM6P33448 61 aa4□□□□□ -1.77
RPN7YPR108W RSM18P40033 138 aa4□□□□□ -1.77
RPN7YPR108W BSC4P53841 131 aa4□□□□□ -1.77
RPN7YPR108W YHR007C-AQ07074 71 aa3.99□□□□□ -1.77
RPN7YPR108W YJL133C-AQ3E7A3 74 aa3.99□□□□□ -1.77
RPN7YPR108W TDA8Q6B2U8 126 aa3.99□□□□□ -1.77
RPN7YPR108W TRA1P38811 3744 aa3.98□□□□□ -1.77
RPN7YPR108W YBL112CQ3E7Y4 105 aa3.97□□□□□ -1.77
RPN7YPR108W NUM1Q00402 2748 aa3.96□□□□□ -1.78
RPN7YPR108W ECM19Q06011 112 aa3.96□□□□□ -1.78
RPN7YPR108W YJR085CP47131 105 aaKnown RBP3.95□□□□□ -1.78
RPN7YPR108W YNL184CP53876 108 aa3.95□□□□□ -1.78
RPN7YPR108W YHL018WP38744 120 aaPredicted RBP3.94□□□□□ -1.78
RPN7YPR108W YLR162WQ06235 118 aa3.94□□□□□ -1.78
RPN7YPR108W YOL097W-AQ3E7Y9 61 aa3.94□□□□□ -1.78
RPN7YPR108W YDR119W-AQ2V2P9 66 aa3.93□□□□□ -1.78
RPN7YPR108W YPR195CQ06594 109 aa3.92□□□□□ -1.78
RPN7YPR108W YIR021W-AQ3E739 70 aa3.92□□□□□ -1.78
RPN7YPR108W YDR182W-AQ3E796 67 aa3.92□□□□□ -1.78
RPN7YPR108W MMS2P53152 137 aa3.91□□□□□ -1.78
RPN7YPR108W KTI11Q3E840 82 aa3.91□□□□□ -1.78
RPN7YPR108W MIC10Q96VH5 97 aa3.91□□□□□ -1.78
RPN7YPR108W AIM4P38305 123 aaPredicted RBP3.9□□□□□ -1.79
RPN7YPR108W YER187WP40102 141 aa3.9□□□□□ -1.79
RPN7YPR108W KSH1Q8TGJ3 72 aa3.9□□□□□ -1.79
RPN7YPR108W YEL045CP32616 141 aa3.89□□□□□ -1.79
RPN7YPR108W GIS2P53849 153 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
RPN7YPR108W UTP20P35194 2493 aaKnown RBP3.89□□□□□ -1.79
RPN7YPR108W YOR268CQ08734 132 aa3.88□□□□□ -1.79
RPN7YPR108W RPL36AP05745 100 aaPredicted RBP3.87□□□□□ -1.79
RPN7YPR108W EDC1P53080 175 aaPredicted RBP3.87□□□□□ -1.79
RPN7YPR108W YGL149WP53116 101 aa3.87□□□□□ -1.79
RPN7YPR108W YAR064WP39563 99 aa3.86□□□□□ -1.79
RPN7YPR108W YIL102CP40488 101 aa3.86□□□□□ -1.79
RPN7YPR108W LCL2Q08045 131 aa3.86□□□□□ -1.79
RPN7YPR108W COX7P10174 60 aa3.85□□□□□ -1.79
RPN7YPR108W LIP1Q03579 150 aa3.82□□□□□ -1.8
RPN7YPR108W YOL014WQ08110 124 aa3.82□□□□□ -1.8
RPN7YPR108W HUB1Q6Q546 73 aa3.82□□□□□ -1.8
RPN7YPR108W NOP10Q6Q547 58 aaPredicted RBP3.82□□□□□ -1.8
RPN7YPR108W YCR043CP25361 127 aa3.81□□□□□ -1.8
RPN7YPR108W YBR027CP38220 110 aa3.8□□□□□ -1.8
RPN7YPR108W HHF1P02309 103 aaKnown RBP3.79□□□□□ -1.8
RPN7YPR108W YOL013W-AP0C272 63 aaPredicted RBP3.79□□□□□ -1.8
RPN7YPR108W YHL005CP38752 130 aa3.79□□□□□ -1.8
RPN7YPR108W YJL197C-AP0C5P0 93 aa3.78□□□□□ -1.8
RPN7YPR108W YPL080CQ02826 108 aa3.78□□□□□ -1.8
RPN7YPR108W SDH6Q3E785 79 aa3.78□□□□□ -1.8
RPN7YPR108W YHR073W-AP0C5N7 58 aa3.76□□□□□ -1.81
RPN7YPR108W YPR153WQ06537 140 aa3.76□□□□□ -1.81
RPN7YPR108W YKL065W-AQ2V2P2 73 aa3.76□□□□□ -1.81
RPN7YPR108W SBH1P52870 82 aa3.74□□□□□ -1.81
RPN7YPR108W YMR230W-AQ3E7B5 62 aa3.73□□□□□ -1.81
RPN7YPR108W YHR125WP38831 101 aa3.72□□□□□ -1.81
RPN7YPR108W YOL166W-AQ8TGJ1 51 aa3.72□□□□□ -1.81
RPN7YPR108W OST5Q92316 86 aa3.72□□□□□ -1.81
RPN7YPR108W YDR246W-AQ3E763 66 aa3.71□□□□□ -1.82
RPN7YPR108W RPS30AP0CX33 63 aaKnown RBP3.7□□□□□ -1.82
RPN7YPR108W RPS30BP0CX34 63 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 77.2 ms