RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeastyeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH1YKL148C STF1P01098 86 aa8.44□□□□□ -1.06
SDH1YKL148C RPL38P49167 78 aaKnown RBP8.44□□□□□ -1.06
SDH1YKL148C YBR230W-AQ3E762 66 aa8.44□□□□□ -1.06
SDH1YKL148C NUM1Q00402 2748 aa8.43□□□□□ -1.06
SDH1YKL148C UTP20P35194 2493 aaKnown RBP8.43□□□□□ -1.06
SDH1YKL148C YLR156WP0CE96 114 aa8.42□□□□□ -1.06
SDH1YKL148C YLR159WP0CE97 114 aa8.42□□□□□ -1.06
SDH1YKL148C YLR161WP0CE98 114 aa8.42□□□□□ -1.06
SDH1YKL148C YJL127C-BQ3E828 52 aa8.42□□□□□ -1.06
SDH1YKL148C TOM6P33448 61 aa8.41□□□□□ -1.06
SDH1YKL148C YKL069WP36088 180 aa8.41□□□□□ -1.06
SDH1YKL148C TDA2P40045 126 aa8.4□□□□□ -1.06
SDH1YKL148C YLR307C-AQ3E825 87 aa8.39□□□□□ -1.07
SDH1YKL148C SFT1P43682 97 aa8.39□□□□□ -1.07
SDH1YKL148C YAR023CD6VPM8 179 aa8.38□□□□□ -1.07
SDH1YKL148C Q0032Q9ZZX7 96 aa8.38□□□□□ -1.07
SDH1YKL148C ECM12O13529 151 aa8.37□□□□□ -1.07
SDH1YKL148C SNA2P56508 79 aa8.37□□□□□ -1.07
SDH1YKL148C RSM18P40033 138 aa8.36□□□□□ -1.07
SDH1YKL148C YLR122CQ12312 125 aa8.36□□□□□ -1.07
SDH1YKL148C BET1P22804 142 aa8.35□□□□□ -1.07
SDH1YKL148C ICS3P47034 131 aa8.35□□□□□ -1.07
SDH1YKL148C YNL042W-BQ3E7Z2 85 aa8.35□□□□□ -1.07
SDH1YKL148C YER187WP40102 141 aa8.31□□□□□ -1.08
SDH1YKL148C ATP20Q12233 115 aa8.31□□□□□ -1.08
SDH1YKL148C YKL183C-AQ3E765 70 aa8.31□□□□□ -1.08
SDH1YKL148C YLR415CO13578 112 aa8.31□□□□□ -1.08
SDH1YKL148C AUA1P32450 94 aa8.29□□□□□ -1.08
SDH1YKL148C YHR213W-BQ8TGK1 99 aa8.29□□□□□ -1.08
SDH1YKL148C COX23P38824 151 aa8.28□□□□□ -1.08
SDH1YKL148C EDC2P40023 145 aaPredicted RBP8.28□□□□□ -1.08
SDH1YKL148C YGL041C-BQ3E750 60 aa8.28□□□□□ -1.08
SDH1YKL148C YDR246W-AQ3E763 66 aa8.28□□□□□ -1.08
SDH1YKL148C YOL014WQ08110 124 aa8.27□□□□□ -1.09
SDH1YKL148C RPL11AP0C0W9 174 aaKnown RBP8.26□□□□□ -1.09
SDH1YKL148C RPL11BQ3E757 174 aaPredicted RBP8.26□□□□□ -1.09
SDH1YKL148C SPT4P32914 102 aaPredicted RBP8.23□□□□□ -1.09
SDH1YKL148C YRA2P36036 203 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
SDH1YKL148C YJL133C-AQ3E7A3 74 aa8.23□□□□□ -1.09
SDH1YKL148C AIM4P38305 123 aaPredicted RBP8.22□□□□□ -1.09
SDH1YKL148C YOR314WQ12506 109 aa8.22□□□□□ -1.09
SDH1YKL148C RPL36BO14455 100 aaKnown RBP8.21□□□□□ -1.1
SDH1YKL148C PEX22P39718 180 aa8.21□□□□□ -1.1
SDH1YKL148C YGL193CP53097 103 aa8.2□□□□□ -1.1
SDH1YKL148C DDR2P89113 61 aa8.2□□□□□ -1.1
SDH1YKL148C YLR361C-AQ3E795 98 aa8.2□□□□□ -1.1
SDH1YKL148C YHR007C-AQ07074 71 aa8.19□□□□□ -1.1
SDH1YKL148C YCR050CP25630 102 aa8.19□□□□□ -1.1
SDH1YKL148C BSC4P53841 131 aa8.19□□□□□ -1.1
SDH1YKL148C NOP10Q6Q547 58 aaPredicted RBP8.19□□□□□ -1.1
SDH1YKL148C TDA8Q6B2U8 126 aa8.16□□□□□ -1.1
SDH1YKL148C YOR072WQ08486 104 aa8.15□□□□□ -1.1
SDH1YKL148C GIS2P53849 153 aaKnown RBP RIP-Chip data8.15□□□□□ -1.11not detected
SDH1YKL148C ECM19Q06011 112 aa8.15□□□□□ -1.11
SDH1YKL148C DYN1P36022 4092 aa8.13□□□□□ -1.11
SDH1YKL148C YER039C-AP0CD97 72 aa8.13□□□□□ -1.11
SDH1YKL148C YEL045CP32616 141 aa8.09□□□□□ -1.11
SDH1YKL148C YLR162WQ06235 118 aa8.08□□□□□ -1.12
SDH1YKL148C MIC10Q96VH5 97 aa8.07□□□□□ -1.12
SDH1YKL148C YDR182W-AQ3E796 67 aa8.07□□□□□ -1.12
SDH1YKL148C MRP10O75012 95 aa8.06□□□□□ -1.12
SDH1YKL148C YDR034C-AP0C289 58 aa8.05□□□□□ -1.12
SDH1YKL148C YOL166W-AQ8TGJ1 51 aa8.05□□□□□ -1.12
SDH1YKL148C RPL36AP05745 100 aaPredicted RBP8.04□□□□□ -1.12
SDH1YKL148C HOT13P36078 116 aa8.03□□□□□ -1.12
SDH1YKL148C YPR195CQ06594 109 aa8.03□□□□□ -1.12
SDH1YKL148C YIL102CP40488 101 aa8.01□□□□□ -1.13
SDH1YKL148C YBR182C-AQ8TGU6 64 aa8.01□□□□□ -1.13
SDH1YKL148C LIP1Q03579 150 aa7.99□□□□□ -1.13
SDH1YKL148C YMR230W-AQ3E7B5 62 aa7.99□□□□□ -1.13
SDH1YKL148C SBH1P52870 82 aa7.98□□□□□ -1.13
SDH1YKL148C YJL197C-AP0C5P0 93 aa7.97□□□□□ -1.13
SDH1YKL148C YGR121W-AQ3E816 71 aa7.96□□□□□ -1.13
SDH1YKL148C YHL005CP38752 130 aa7.94□□□□□ -1.14
SDH1YKL148C YAR064WP39563 99 aa7.92□□□□□ -1.14
SDH1YKL148C YOL013W-AP0C272 63 aaPredicted RBP7.91□□□□□ -1.14
SDH1YKL148C RPS30AP0CX33 63 aaKnown RBP7.9□□□□□ -1.15
SDH1YKL148C RPS30BP0CX34 63 aaKnown RBP7.9□□□□□ -1.15
SDH1YKL148C YBR027CP38220 110 aa7.88□□□□□ -1.15
SDH1YKL148C YCR043CP25361 127 aa7.87□□□□□ -1.15
SDH1YKL148C SPG1P50088 95 aa7.87□□□□□ -1.15
SDH1YKL148C KSH1Q8TGJ3 72 aa7.83□□□□□ -1.16
SDH1YKL148C YJR085CP47131 105 aaKnown RBP7.82□□□□□ -1.16
SDH1YKL148C YLR157W-DP0CE99 70 aa7.81□□□□□ -1.16
SDH1YKL148C KTI11Q3E840 82 aa7.81□□□□□ -1.16
SDH1YKL148C YOL097W-AQ3E7Y9 61 aa7.79□□□□□ -1.16
SDH1YKL148C YPR153WQ06537 140 aa7.77□□□□□ -1.17
SDH1YKL148C LCL2Q08045 131 aa7.75□□□□□ -1.17
SDH1YKL148C LCL1Q02786 101 aa7.74□□□□□ -1.17
SDH1YKL148C YOR381W-AQ3E804 55 aa7.74□□□□□ -1.17
SDH1YKL148C YHR125WP38831 101 aa7.73□□□□□ -1.17
SDH1YKL148C YDL012CQ12489 107 aa7.73□□□□□ -1.17
SDH1YKL148C YGR164WP53291 111 aa7.72□□□□□ -1.17
SDH1YKL148C YOR268CQ08734 132 aa7.71□□□□□ -1.18
SDH1YKL148C SDH6Q3E785 79 aa7.68□□□□□ -1.18
SDH1YKL148C YLR412C-AQ3E742 68 aa7.68□□□□□ -1.18
SDH1YKL148C YBR121C-AP0C5L4 52 aa7.67□□□□□ -1.18
SDH1YKL148C MMS2P53152 137 aa7.67□□□□□ -1.18
SDH1YKL148C YKL065W-AQ2V2P2 73 aa7.67□□□□□ -1.18
SDH1YKL148C YMR122CQ03879 124 aa7.66□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms