RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W RPL38P49167 78 aaKnown RBP5.54□□□□□ -1.52
ABP1YCR088W YPR010C-AA5Z2X5 72 aa5.53□□□□□ -1.52
ABP1YCR088W YLR415CO13578 112 aa5.52□□□□□ -1.53
ABP1YCR088W YBR230W-AQ3E762 66 aa5.51□□□□□ -1.53
ABP1YCR088W FYV5P25585 152 aa5.5□□□□□ -1.53
ABP1YCR088W TOM6P33448 61 aa5.5□□□□□ -1.53
ABP1YCR088W RSM19P53733 91 aaPredicted RBP5.5□□□□□ -1.53
ABP1YCR088W YDR246W-AQ3E763 66 aa5.5□□□□□ -1.53
ABP1YCR088W DYN1P36022 4092 aa5.5□□□□□ -1.53
ABP1YCR088W STF1P01098 86 aa5.5□□□□□ -1.53
ABP1YCR088W SPC1P46965 94 aa5.5□□□□□ -1.53
ABP1YCR088W TSC3Q3E790 80 aa5.5□□□□□ -1.53
ABP1YCR088W YJL127C-BQ3E828 52 aa5.5□□□□□ -1.53
ABP1YCR088W ECM12O13529 151 aa5.49□□□□□ -1.53
ABP1YCR088W RPL26AP05743 127 aaKnown RBP5.49□□□□□ -1.53
ABP1YCR088W RSM18P40033 138 aa5.49□□□□□ -1.53
ABP1YCR088W RPL26BP53221 127 aaKnown RBP5.49□□□□□ -1.53
ABP1YCR088W YLR307C-AQ3E825 87 aa5.49□□□□□ -1.53
ABP1YCR088W ICS3P47034 131 aa5.47□□□□□ -1.53
ABP1YCR088W YOL014WQ08110 124 aa5.47□□□□□ -1.53
ABP1YCR088W TDA2P40045 126 aa5.47□□□□□ -1.53
ABP1YCR088W YER187WP40102 141 aa5.47□□□□□ -1.53
ABP1YCR088W RTC6O14464 93 aa5.46□□□□□ -1.54
ABP1YCR088W YAR023CD6VPM8 179 aa5.44□□□□□ -1.54
ABP1YCR088W BET1P22804 142 aa5.44□□□□□ -1.54
ABP1YCR088W AUA1P32450 94 aa5.44□□□□□ -1.54
ABP1YCR088W SNA2P56508 79 aa5.44□□□□□ -1.54
ABP1YCR088W ATP20Q12233 115 aa5.44□□□□□ -1.54
ABP1YCR088W Q0032Q9ZZX7 96 aa5.44□□□□□ -1.54
ABP1YCR088W RPL11AP0C0W9 174 aaKnown RBP5.43□□□□□ -1.54
ABP1YCR088W YLR361C-AQ3E795 98 aa5.43□□□□□ -1.54
ABP1YCR088W YLR122CQ12312 125 aa5.42□□□□□ -1.54
ABP1YCR088W YNL042W-BQ3E7Z2 85 aa5.42□□□□□ -1.54
ABP1YCR088W YHR213W-BQ8TGK1 99 aa5.42□□□□□ -1.54
ABP1YCR088W YCR050CP25630 102 aa5.4□□□□□ -1.54
ABP1YCR088W COX23P38824 151 aa5.4□□□□□ -1.54
ABP1YCR088W SFT1P43682 97 aa5.4□□□□□ -1.54
ABP1YCR088W NOP10Q6Q547 58 aaPredicted RBP5.4□□□□□ -1.54
ABP1YCR088W YRA2P36036 203 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
ABP1YCR088W AIM4P38305 123 aaPredicted RBP5.39□□□□□ -1.55
ABP1YCR088W EDC2P40023 145 aaPredicted RBP5.39□□□□□ -1.55
ABP1YCR088W RPL11BQ3E757 174 aaPredicted RBP5.39□□□□□ -1.55
ABP1YCR088W YKL183C-AQ3E765 70 aa5.39□□□□□ -1.55
ABP1YCR088W YER039C-AP0CD97 72 aa5.38□□□□□ -1.55
ABP1YCR088W YJL133C-AQ3E7A3 74 aa5.38□□□□□ -1.55
ABP1YCR088W PEX22P39718 180 aa5.36□□□□□ -1.55
ABP1YCR088W BSC4P53841 131 aa5.36□□□□□ -1.55
ABP1YCR088W GIS2P53849 153 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
ABP1YCR088W YHR007C-AQ07074 71 aa5.36□□□□□ -1.55
ABP1YCR088W YOR314WQ12506 109 aa5.35□□□□□ -1.55
ABP1YCR088W RPL36BO14455 100 aaKnown RBP5.34□□□□□ -1.55
ABP1YCR088W SPT4P32914 102 aaPredicted RBP5.34□□□□□ -1.55
ABP1YCR088W YGL193CP53097 103 aa5.33□□□□□ -1.56
ABP1YCR088W DDR2P89113 61 aa5.33□□□□□ -1.56
ABP1YCR088W ECM19Q06011 112 aa5.32□□□□□ -1.56
ABP1YCR088W YGL041C-BQ3E750 60 aa5.32□□□□□ -1.56
ABP1YCR088W TDA8Q6B2U8 126 aa5.32□□□□□ -1.56
ABP1YCR088W YOL166W-AQ8TGJ1 51 aa5.32□□□□□ -1.56
ABP1YCR088W YEL045CP32616 141 aa5.31□□□□□ -1.56
ABP1YCR088W YOR072WQ08486 104 aa5.31□□□□□ -1.56
ABP1YCR088W YMR230W-AQ3E7B5 62 aa5.29□□□□□ -1.56
ABP1YCR088W MIC10Q96VH5 97 aa5.29□□□□□ -1.56
ABP1YCR088W YPR195CQ06594 109 aa5.28□□□□□ -1.56
ABP1YCR088W YLR162WQ06235 118 aa5.27□□□□□ -1.57
ABP1YCR088W RPL36AP05745 100 aaPredicted RBP5.25□□□□□ -1.57
ABP1YCR088W YIL102CP40488 101 aa5.24□□□□□ -1.57
ABP1YCR088W YDR182W-AQ3E796 67 aa5.24□□□□□ -1.57
ABP1YCR088W YJL197C-AP0C5P0 93 aa5.24□□□□□ -1.57
ABP1YCR088W SBH1P52870 82 aa5.24□□□□□ -1.57
ABP1YCR088W LIP1Q03579 150 aa5.24□□□□□ -1.57
ABP1YCR088W YDR034C-AP0C289 58 aa5.22□□□□□ -1.57
ABP1YCR088W YHL005CP38752 130 aa5.22□□□□□ -1.57
ABP1YCR088W RPS30AP0CX33 63 aaKnown RBP5.2□□□□□ -1.58
ABP1YCR088W RPS30BP0CX34 63 aaKnown RBP5.2□□□□□ -1.58
ABP1YCR088W HOT13P36078 116 aa5.19□□□□□ -1.58
ABP1YCR088W YOL013W-AP0C272 63 aaPredicted RBP5.19□□□□□ -1.58
ABP1YCR088W KSH1Q8TGJ3 72 aa5.18□□□□□ -1.58
ABP1YCR088W YBR027CP38220 110 aa5.17□□□□□ -1.58
ABP1YCR088W YAR064WP39563 99 aa5.17□□□□□ -1.58
ABP1YCR088W YGR121W-AQ3E816 71 aa5.16□□□□□ -1.58
ABP1YCR088W YCR043CP25361 127 aa5.15□□□□□ -1.58
ABP1YCR088W YBR182C-AQ8TGU6 64 aa5.14□□□□□ -1.59
ABP1YCR088W YOR268CQ08734 132 aa5.14□□□□□ -1.59
ABP1YCR088W YDL012CQ12489 107 aa5.09□□□□□ -1.59
ABP1YCR088W YOR381W-AQ3E804 55 aa5.09□□□□□ -1.6
ABP1YCR088W YDR010CQ12426 110 aa5.08□□□□□ -1.6
ABP1YCR088W KTI11Q3E840 82 aa5.08□□□□□ -1.6
ABP1YCR088W SPG1P50088 95 aa5.07□□□□□ -1.6
ABP1YCR088W YPR153WQ06537 140 aa5.07□□□□□ -1.6
ABP1YCR088W YHR125WP38831 101 aa5.06□□□□□ -1.6
ABP1YCR088W LCL2Q08045 131 aa5.06□□□□□ -1.6
ABP1YCR088W YJR085CP47131 105 aaKnown RBP5.06□□□□□ -1.6
ABP1YCR088W YGR164WP53291 111 aa5.05□□□□□ -1.6
ABP1YCR088W YMR122CQ03879 124 aa5.04□□□□□ -1.6
ABP1YCR088W YLR157W-DP0CE99 70 aa5.04□□□□□ -1.6
ABP1YCR088W YOL097W-AQ3E7Y9 61 aa5.04□□□□□ -1.6
ABP1YCR088W YBR121C-AP0C5L4 52 aa5.03□□□□□ -1.6
ABP1YCR088W YLR412C-AQ3E742 68 aa5.02□□□□□ -1.61
ABP1YCR088W MMS2P53152 137 aa5□□□□□ -1.61
ABP1YCR088W SDH6Q3E785 79 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms