RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 PWP2Q15269 919 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 OOSP2Q86WS3 158 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 KIAA2013Q8IYS2 634 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 KCNB2Q92953 911 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 TMA16Q96EY4 203 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 DNAJC7Q99615 494 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 TASP1Q9H6P5 420 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 MPP6Q9NZW5 540 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 ITGA11Q9UKX5 1188 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 FAM32AQ9Y421 112 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 PKP3Q9Y446 797 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 FAM95CA0A1B0GW59 222 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 TRPC5OSA6NMA1 111 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 RGS4P49798 205 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 KPNB1Q14974 876 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 MTFR1Q15390 333 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 NOA1Q8NC60 698 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 DDI1Q8WTU0 396 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 SRPK1Q96SB4 655 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 PABPC3Q9H361 631 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 SNTG2Q9NY99 539 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 PAIP2BQ9ULR5 123 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 PLAGL2Q9UPG8 496 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 PPP1R3GB7ZBB8 358 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 PJA2O43164 708 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 PSTPIP1O43586 416 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 LGALS2P05162 132 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 PREPLQ4J6C6 727 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 BTNL9Q6UXG8 535 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 C3orf62Q6ZUJ4 267 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 GPR142Q7Z601 462 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 CLEC4FQ8N1N0 589 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 NR1H4Q96RI1 486 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 IL1RAPL1Q9NZN1 696 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 TRIM10Q9UDY6 481 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 IGF2BP3O00425 579 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 DMC1Q14565 340 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 STARD3Q14849 445 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 FAM171A1Q5VUB5 890 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 CCNJLQ8IV13 435 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 C1orf131Q8NDD1 294 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 RMDN2Q96LZ7 410 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 RBBP8Q99708 897 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 ZNF556Q9HAH1 456 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 IL17RBQ9NRM6 502 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 OLFML3Q9NRN5 406 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 CHMP2BQ9UQN3 213 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 O00370 1275 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 PTK6Q13882 451 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 GIT2Q14161 759 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 PCSK7Q16549 785 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 PTRHD1Q6GMV3 140 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 CXCL17Q6UXB2 119 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 TRIM48Q8IWZ4 208 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 REXO1L1PQ8IX06 675 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 AGR3Q8TD06 166 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 ELMO2Q96JJ3 720 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 SLC12A8A0AV02 714 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 CCDC78A2IDD5 438 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 LZTS3O60299 673 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 HSD17B3P37058 310 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 PSMD7P51665 324 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 PTF1AQ7RTS3 328 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 TRIM69Q86WT6 500 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 SLC13A5Q86YT5 568 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 OR2W6PQ8NHA6 318 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 SCN3BQ9NY72 215 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 GGT7Q9UJ14 662 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 PLA2G4CQ9UP65 541 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 NRCAMQ92823 1304 aa13.78□□□□□ -0.2
SMARCA4-216ENST00000591545 MAGEA13PA6NCF6 341 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 ZSCAN9O15535 394 aaPredicted RBP13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 WDR47O94967 919 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 MAPTP10636 758 aaKnown RBP13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 PRKAR2AP13861 404 aaKnown RBP13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 STIP1P31948 543 aaKnown RBP13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 PPM1LQ5SGD2 360 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 RIN2Q8WYP3 895 aaPredicted RBP13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 MKL1Q969V6 931 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 ATXN7L3BQ96GX2 97 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 FAR2Q96K12 515 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 YIPF2Q9BWQ6 316 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 TLR8Q9NR97 1041 aaKnown RBP13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 GEMIN8Q9NWZ8 242 aaKnown RBP13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 ITM2BQ9Y287 266 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 ZNF263O14978 683 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 CKBP12277 381 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 RUNX1T1Q06455 604 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 MYBPC2Q14324 1141 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 CES5AQ6NT32 575 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 TPCN2Q8NHX9 752 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 SYT15Q9BQS2 421 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 SPATA16Q9BXB7 569 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 ASB7Q9H672 318 aa13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 COPG1Q9Y678 874 aaKnown RBP13.77□□□□□ -0.2
SMARCA4-216ENST00000591545 C5orf58C9J3I9 102 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 TRIM66O15016 1216 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 SEC24DO94855 1032 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 FDFT1P37268 417 aa13.77□□□□□ -0.21
SMARCA4-216ENST00000591545 EFEMP1Q12805 493 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms