RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 CD101Q93033 1021 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 PARK7Q99497 189 aaKnown RBP11.78□□□□□ -0.52
TOP3A-217ENST00000584582 SHCBP1LQ9BZQ2 653 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 PDLIM7Q9NR12 457 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 KLC4Q9NSK0 619 aa11.78□□□□□ -0.52
TOP3A-217ENST00000584582 SIGLEC16A6NMB1 481 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 TRIM49D1C9J1S8 452 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 FAM155BO75949 473 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 C22orf31O95567 290 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 MCF2P10911 925 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 ADRA1DP25100 572 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 TARSP26639 723 aaKnown RBP11.77□□□□□ -0.53
TOP3A-217ENST00000584582 SLC26A2P50443 739 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 GTF2A2P52657 109 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 CFAP157Q5JU67 520 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 ZNF618Q5T7W0 954 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 SYDE1Q6ZW31 735 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-217ENST00000584582 RAPH1Q70E73 1250 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 PGM2Q96G03 612 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 CXCL16Q9H2A7 254 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 CYTH4Q9UIA0 394 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 PRG3Q9Y2Y8 225 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-217ENST00000584582 TCRBV7S3A2A0A539 114 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 CYB561D2O14569 222 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 SCTRP47872 440 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 ERMARDQ5T6L9 678 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 TSHZ1Q6ZSZ6 1077 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 ILDR2Q71H61 639 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 HIPK4Q8NE63 616 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 LRRC37BQ96QE4 947 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 ABHD16BQ9H3Z7 469 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 TMPRSS4Q9NRS4 437 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.77□□□□□ -0.53
TOP3A-217ENST00000584582 PSMC3IPQ9P2W1 217 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-217ENST00000584582 RREB1Q92766 1687 aa11.77□□□□□ -0.53
TOP3A-217ENST00000584582 DRG2P55039 364 aaKnown RBP11.76□□□□□ -0.53
TOP3A-217ENST00000584582 SEPT6Q14141 434 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 TARBP2Q15633 366 aaKnown RBP11.76□□□□□ -0.53
TOP3A-217ENST00000584582 PYROXD2Q8N2H3 581 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 ARMC2Q8NEN0 867 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 CELF6Q96J87 481 aaKnown RBP11.76□□□□□ -0.53
TOP3A-217ENST00000584582 TTC25Q96NG3 672 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 ROPN1BQ9BZX4 212 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-217ENST00000584582 NACA2Q9H009 215 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 ROPN1Q9HAT0 212 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-217ENST00000584582 SLC12A6Q9UHW9 1150 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 AP4E1Q9UPM8 1137 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 CITO14578 2027 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 BRWD3Q6RI45 1802 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 SHOX2O60902 331 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-217ENST00000584582 HMBSP08397 361 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 PYGBP11216 843 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 CDKN2BP42772 138 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 ARHGAP1Q07960 439 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 WSCD1Q658N2 575 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 XYLT1Q86Y38 959 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 WDTC1Q8N5D0 677 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 USP6NLQ92738 828 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 TMEM237Q96Q45 408 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 CYTH2Q99418 400 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 SNRNP25Q9BV90 132 aaKnown RBP11.76□□□□□ -0.53
TOP3A-217ENST00000584582 ZNF518BQ9C0D4 1074 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 TMEM51Q9NW97 253 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 DDIT4Q9NX09 232 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 NUDT17P0C025 328 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 SMIM10L2AP0DMW4 78 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 SMIM10L2BP0DMW5 78 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 GHRP10912 638 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 DRD4P21917 467 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 CYP2F1P24903 491 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 THPOP40225 353 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 SARNPP82979 210 aaKnown RBP11.76□□□□□ -0.53
TOP3A-217ENST00000584582 DEUP1Q05D60 604 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 CA9Q16790 459 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 KBTBD12Q3ZCT8 623 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 SLC27A1Q6PCB7 646 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 ADGRF2Q8IZF7 708 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 KIRREL3Q8IZU9 778 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 DEFB106AQ8N104 65 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 BRI3BPQ8WY22 251 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 LGMNQ99538 433 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 FZD8Q9H461 694 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 ASB7Q9H672 318 aa11.76□□□□□ -0.53
TOP3A-217ENST00000584582 PPARGC1AQ9UBK2 798 aaKnown RBP11.76□□□□□ -0.53
TOP3A-217ENST00000584582 MYO18AQ92614 2054 aaKnown RBP11.76□□□□□ -0.53
TOP3A-217ENST00000584582 IQANK1A0A1B0GTG1 560 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 KPNA7A9QM74 516 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 DFFAO00273 331 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 TSPAN1O60635 241 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 MLH1P40692 756 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 TAF6P49848 677 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 GBE1Q04446 702 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 SH3D19Q5HYK7 790 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 FNBP1LQ5T0N5 605 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 SCYL1Q96KG9 808 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 TSNARE1Q96NA8 513 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 IFT122Q9HBG6 1241 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 PHTF1Q9UMS5 762 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 IGF2BP3O00425 579 aaKnown RBP eCLIP11.75□□□□□ -0.53
TOP3A-217ENST00000584582 B4GALT4O60513 344 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms