RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 TRIB2Q92519 343 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 P3H4Q92791 437 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 CCDC77Q9BR77 488 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 CTNNAL1Q9UBT7 734 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 FAM155AB1AL88 458 aaPredicted RBP14.68□□□□□ -0.06
VPS33B-208ENST00000574755 CTSHP09668 335 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 RDXP35241 583 aaKnown RBP14.68□□□□□ -0.06
VPS33B-208ENST00000574755 MFSD14CQ5VZR4 134 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 GDF6Q6KF10 455 aaPredicted RBP14.68□□□□□ -0.06
VPS33B-208ENST00000574755 SRLQ86TD4 932 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 UNC45BQ8IWX7 931 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 ARHGAP39Q9C0H5 1083 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 SPC25Q9HBM1 224 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 GPATCH2LQ9NWQ4 482 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 ST3GAL5Q9UNP4 418 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 TRPV2Q9Y5S1 764 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 SCN10AQ9Y5Y9 1956 aa14.68□□□□□ -0.06
VPS33B-208ENST00000574755 GOLGA8MH3BSY2 632 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 FCGRTP55899 365 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 PDK2Q15119 407 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 ZC3H12AQ5D1E8 599 aaKnown RBP14.67□□□□□ -0.06
VPS33B-208ENST00000574755 HP1BP3Q5SSJ5 553 aaPredicted RBP14.67□□□□□ -0.06
VPS33B-208ENST00000574755 NPNTQ6UXI9 565 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 EXOC3L1Q86VI1 746 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 ZC3H18Q86VM9 953 aaKnown RBP14.67□□□□□ -0.06
VPS33B-208ENST00000574755 TOP6BLQ8N6T0 577 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 FAM71DQ8N9W8 422 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 B3GALNT2Q8NCR0 500 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 PRCCQ92733 491 aaPredicted RBP14.67□□□□□ -0.06
VPS33B-208ENST00000574755 ARHGEF2Q92974 986 aaKnown RBP14.67□□□□□ -0.06
VPS33B-208ENST00000574755 RNF157Q96PX1 679 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 RRP15Q9Y3B9 282 aaKnown RBP14.67□□□□□ -0.06
VPS33B-208ENST00000574755 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.67□□□□□ -0.06
VPS33B-208ENST00000574755 MEIS3P2A8K0S8 358 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 TCEA3O75764 348 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 RARBP10826 455 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 LRPAP1P30533 357 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 HDAC4P56524 1084 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 ROR1Q01973 937 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 STAT4Q14765 748 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 FASTKD3Q14CZ7 662 aaKnown RBP14.67□□□□□ -0.06
VPS33B-208ENST00000574755 NOMO1Q15155 1222 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 CENPUQ71F23 418 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 SLC26A9Q7LBE3 791 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 LIMS2Q7Z4I7 341 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 PPIL6Q8IXY8 311 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 ZBED8Q8IZ13 594 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 TAB3Q8N5C8 712 aaPredicted RBP14.67□□□□□ -0.06
VPS33B-208ENST00000574755 TEKT4Q8WW24 435 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 TTC25Q96NG3 672 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 PPP1R10Q96QC0 940 aaKnown RBP14.67□□□□□ -0.06
VPS33B-208ENST00000574755 TBCBQ99426 244 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 SNRNP25Q9BV90 132 aaKnown RBP14.67□□□□□ -0.06
VPS33B-208ENST00000574755 FAM105AQ9NUU6 356 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 TBK1Q9UHD2 729 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 GABRQQ9UN88 632 aa14.67□□□□□ -0.06
VPS33B-208ENST00000574755 FARP1Q9Y4F1 1045 aaPredicted RBP14.67□□□□□ -0.06
VPS33B-208ENST00000574755 A0A087WUV0 522 aaPredicted RBP14.66□□□□□ -0.06
VPS33B-208ENST00000574755 CYB561D2O14569 222 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 CA12O43570 354 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 MYCNP04198 464 aaPredicted RBP14.66□□□□□ -0.06
VPS33B-208ENST00000574755 TFE3P19532 575 aaPredicted RBP14.66□□□□□ -0.06
VPS33B-208ENST00000574755 RPL22P35268 128 aaKnown RBP14.66□□□□□ -0.06
VPS33B-208ENST00000574755 MLH1P40692 756 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 ACADSBP45954 432 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 HIF1AQ16665 826 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 ERMARDQ5T6L9 678 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 DARS2Q6PI48 645 aaKnown RBP14.66□□□□□ -0.06
VPS33B-208ENST00000574755 C1orf228Q6PIY5 440 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 CPT1BQ92523 772 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 WNT8BQ93098 351 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 CENPTQ96BT3 561 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 XPO6Q96QU8 1125 aaKnown RBP14.66□□□□□ -0.06
VPS33B-208ENST00000574755 NCAPGQ9BPX3 1015 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 INTS9Q9NV88 658 aaKnown RBP14.66□□□□□ -0.06
VPS33B-208ENST00000574755 MDM4O15151 490 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 CDH16O75309 829 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 ABHD2P08910 425 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 WARSP23381 471 aaKnown RBP14.66□□□□□ -0.06
VPS33B-208ENST00000574755 ACAT1P24752 427 aaKnown RBP14.66□□□□□ -0.06
VPS33B-208ENST00000574755 TKTP29401 623 aaKnown RBP14.66□□□□□ -0.06
VPS33B-208ENST00000574755 PTPN9P43378 593 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 FLT3LGP49771 235 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 SLC8A3P57103 927 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 PDIA2Q13087 525 aaKnown RBP14.66□□□□□ -0.06
VPS33B-208ENST00000574755 PPP6R3Q5H9R7 873 aaPredicted RBP14.66□□□□□ -0.06
VPS33B-208ENST00000574755 B4GALNT4Q76KP1 1039 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 OSTM1Q86WC4 334 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 HACE1Q8IYU2 909 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 HSFY1Q96LI6 401 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 ZIC5Q96T25 663 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 PCDH18Q9HCL0 1135 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 CYLDQ9NQC7 956 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 SLC38A7Q9NVC3 462 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 CACNG4Q9UBN1 327 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 ABT1Q9ULW3 272 aaKnown RBP14.66□□□□□ -0.06
VPS33B-208ENST00000574755 TLL2Q9Y6L7 1015 aa14.66□□□□□ -0.06
VPS33B-208ENST00000574755 BRCA2P51587 3418 aa14.65□□□□□ -0.06
VPS33B-208ENST00000574755 H7C0C1 242 aa14.65□□□□□ -0.06
VPS33B-208ENST00000574755 ATP2C2O75185 946 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms