RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 PEX14O75381 377 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 C1QL1O75973 258 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 TTLL1O95922 423 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 ARP10275 920 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 BMP5P22003 454 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 FPR3P25089 353 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 EEF1GP26641 437 aaKnown RBP5.55□□□□□ -1.52
CTR9-204ENST00000529355 PRKAR1BP31321 381 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 GATMP50440 423 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 CCT8P50990 548 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 TIRAPP58753 221 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 PSG6Q00889 435 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 E2F1Q01094 437 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 CLEC9AQ6UXN8 241 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 ZNF551Q7Z340 670 aaPredicted RBP5.55□□□□□ -1.52
CTR9-204ENST00000529355 KRT28Q7Z3Y7 464 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 FAM98AQ8NCA5 519 aaKnown RBP5.55□□□□□ -1.52
CTR9-204ENST00000529355 DEPTORQ8TB45 409 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 BRI3BPQ8WY22 251 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 ZNF566Q969W8 418 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 CTHRC1Q96CG8 243 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 WDYHV1Q96HA8 205 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 CPNE5Q9HCH3 593 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 HEYLQ9NQ87 328 aaPredicted RBP5.55□□□□□ -1.52
CTR9-204ENST00000529355 TRMT13Q9NUP7 481 aaKnown RBP5.55□□□□□ -1.52
CTR9-204ENST00000529355 RGS17Q9UGC6 210 aaPredicted RBP5.55□□□□□ -1.52
CTR9-204ENST00000529355 CCNL1Q9UK58 526 aaPredicted RBP5.55□□□□□ -1.52
CTR9-204ENST00000529355 TLK1Q9UKI8 766 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 ASAP1Q9ULH1 1129 aa5.55□□□□□ -1.52
CTR9-204ENST00000529355 ZMYND8Q9ULU4 1186 aaPredicted RBP5.55□□□□□ -1.52
CTR9-204ENST00000529355 COL11A2P13942 1736 aaPredicted RBP5.54□□□□□ -1.52
CTR9-204ENST00000529355 EXOC5O00471 708 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 SPRY2O43597 315 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 PECAM1P16284 738 aaPredicted RBP5.54□□□□□ -1.52
CTR9-204ENST00000529355 DRD4P21917 467 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 HTR7P34969 479 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 ALDH9A1P49189 494 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 TIAL1Q01085 375 aaKnown RBP eCLIP5.54□□□□□ -1.52
CTR9-204ENST00000529355 DEUP1Q05D60 604 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 ARHGAP15Q53QZ3 475 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 TMTC4Q5T4D3 741 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 GGT6Q6P531 493 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 NAPRTQ6XQN6 538 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 TOGARAM2Q6ZUX3 1019 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 Q6ZWC4 215 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 VPS37AQ8NEZ2 397 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 HIST1H2AAQ96QV6 131 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 VN1R3Q9BXE9 311 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 ZNF700Q9H0M5 742 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 PCDHAC1Q9H158 963 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 R3HDMLQ9H3Y0 253 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 ZNHIT2Q9UHR6 403 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 USP22Q9UPT9 525 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 SLC27A6Q9Y2P4 619 aa5.54□□□□□ -1.52
CTR9-204ENST00000529355 WDR33Q9C0J8 1336 aaKnown RBP5.53□□□□□ -1.52
CTR9-204ENST00000529355 AQP7P3A6NL99 342 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 KCNQ3O43525 872 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 PMPCBO75439 489 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 RHOBTB3O94955 611 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 FAM163BP0C2L3 166 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 NHLRC4P0CG21 123 aaPredicted RBP5.53□□□□□ -1.52
CTR9-204ENST00000529355 MCM5P33992 734 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 PPM1AP35813 382 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 CACNA2D1P54289 1103 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 CYP4F2P78329 520 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 L1TD1Q5T7N2 865 aaKnown RBP5.53□□□□□ -1.52
CTR9-204ENST00000529355 PARS2Q7L3T8 475 aaKnown RBP5.53□□□□□ -1.52
CTR9-204ENST00000529355 BEND5Q7L4P6 421 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 CCDC28AQ8IWP9 274 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 SPICE1Q8N0Z3 855 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 CAGE1Q8TC20 777 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 IPO4Q8TEX9 1081 aaKnown RBP5.53□□□□□ -1.52
CTR9-204ENST00000529355 IPCEF1Q8WWN9 437 aaPredicted RBP5.53□□□□□ -1.52
CTR9-204ENST00000529355 PRR11Q96HE9 360 aaPredicted RBP5.53□□□□□ -1.52
CTR9-204ENST00000529355 FAM227BQ96M60 508 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 DUSP26Q9BV47 211 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 DPCDQ9BVM2 203 aaPredicted RBP5.53□□□□□ -1.52
CTR9-204ENST00000529355 MAGEB5Q9BZ81 275 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.53□□□□□ -1.52
CTR9-204ENST00000529355 SLC25A32Q9H2D1 315 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 SLITRK6Q9H5Y7 841 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 RGL1Q9NZL6 768 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 IGSF9Q9P2J2 1179 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 DNAJB11Q9UBS4 358 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 GABRQQ9UN88 632 aa5.53□□□□□ -1.52
CTR9-204ENST00000529355 PLA2G6O60733 806 aa5.52□□□□□ -1.53
CTR9-204ENST00000529355 NXPH3O95157 252 aa5.52□□□□□ -1.53
CTR9-204ENST00000529355 NUDT3O95989 172 aa5.52□□□□□ -1.53
CTR9-204ENST00000529355 HNRNPCP07910 306 aaKnown RBP eCLIP5.52□□□□□ -1.53
CTR9-204ENST00000529355 NDUFB7P17568 137 aa5.52□□□□□ -1.53
CTR9-204ENST00000529355 EPHA3P29320 983 aa5.52□□□□□ -1.53
CTR9-204ENST00000529355 HTR3AP46098 478 aa5.52□□□□□ -1.53
CTR9-204ENST00000529355 COPAP53621 1224 aa5.52□□□□□ -1.53
CTR9-204ENST00000529355 EEFSECP57772 596 aaKnown RBP5.52□□□□□ -1.53
CTR9-204ENST00000529355 HDAC1Q13547 482 aaPredicted RBP5.52□□□□□ -1.53
CTR9-204ENST00000529355 RNASE12Q5GAN4 147 aaKnown RBP5.52□□□□□ -1.53
CTR9-204ENST00000529355 PLAC9Q5JTB6 97 aa5.52□□□□□ -1.53
CTR9-204ENST00000529355 PCID2Q5JVF3 399 aa5.52□□□□□ -1.53
CTR9-204ENST00000529355 AKNAD1Q5T1N1 836 aa5.52□□□□□ -1.53
CTR9-204ENST00000529355 GRHL2Q6ISB3 625 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms