RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 CLDN10P78369 228 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 BIRC3Q13489 604 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 PNOCQ13519 176 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 GAS6Q14393 721 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 FILIP1LQ4L180 1135 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 SPOPLQ6IQ16 392 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 DPH6Q7L8W6 267 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 SLC9A9Q8IVB4 645 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 YAF2Q8IY57 180 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 OR6B3Q8NGW1 331 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 ZNF483Q8TF39 744 aaPredicted RBP10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 EXOC4Q96A65 974 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 GCNAQ96QF7 691 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 BCO2Q9BYV7 579 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 ZNF518BQ9C0D4 1074 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 SCAND2PQ9GZW5 306 aaPredicted RBP10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 IRF2BPLQ9H1B7 796 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 RMI1Q9H9A7 625 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 TRPC7Q9HCX4 862 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 TRPV5Q9NQA5 729 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 UTP6Q9NYH9 597 aaKnown RBP10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 HMGXB4Q9UGU5 601 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 CDH9Q9ULB4 789 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 OBSL1O75147 1896 aa10.27□□□□□ -0.76
NIF3L1-202ENST00000409020 NUP210Q8TEM1 1887 aaPredicted RBP10.27□□□□□ -0.76
NIF3L1-202ENST00000409020 PATJQ8NI35 1801 aa10.27□□□□□ -0.76
NIF3L1-202ENST00000409020 SPEGQ15772 3267 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 C2orf78A6NCI8 922 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 SMAPO00193 183 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 PDXKO00764 312 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 TACC1O75410 805 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 AKAP3O75969 853 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 RHOBTB3O94955 611 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 FGF19O95750 216 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 TRIM49P0CI25 452 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 TRIM49CP0CI26 452 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 TNNC1P63316 161 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 FOXK1P85037 733 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 ZXDBP98169 803 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 CSTF1Q05048 431 aaKnown RBP10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 PSMD2Q13200 908 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 TRPC3Q13507 836 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 NCOA4Q13772 614 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 CEP135Q66GS9 1140 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 KLHL10Q6JEL2 608 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 Q6ZS52 159 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 FMR1NBQ8N0W7 255 aaPredicted RBP10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 TTC16Q8NEE8 873 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 MYCBPAPQ8TBZ2 947 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 SPATA18Q8TC71 538 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 BPIFB1Q8TDL5 484 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 C17orf50Q8WW18 174 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 FAM3CQ92520 227 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 NKD2Q969F2 451 aaPredicted RBP10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 FUBP3Q96I24 572 aaKnown RBP eCLIP10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 TMEM121BQ9BXQ6 578 aaPredicted RBP10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 OSBPL6Q9BZF3 934 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 SNX25Q9H3E2 840 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 OCEL1Q9H607 264 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 HPS4Q9NQG7 708 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 USP25Q9UHP3 1055 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 BOLA1Q9Y3E2 137 aa10.27□□□□□ -0.77
NIF3L1-202ENST00000409020 A0A087WUV0 522 aaPredicted RBP10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 EIF3CLB5ME19 914 aaKnown RBP10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 F8VP50 259 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 SPECC1L-ADORA2AF8WAN1 911 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 PHACTR2O75167 634 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 STAU1O95793 577 aaKnown RBP10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 CSH1P0DML2 217 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 CSH2P0DML3 217 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 CHRNB1P11230 501 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 ARSAP15289 507 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 PTPN1P18031 435 aaKnown RBP10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 AVPR1AP37288 418 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 GRIK1P39086 918 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 KPNA1P52294 538 aaPredicted RBP10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 RPL10AP62906 217 aaKnown RBP10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 ZNF699Q32M78 642 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 GBP6Q6ZN66 633 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 MON1AQ86VX9 555 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 PLPP6Q8IY26 295 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 RNF214Q8ND24 703 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 CSGALNACT1Q8TDX6 532 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 TMEM174Q8WUU8 243 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 TRMT2BQ96GJ1 504 aaKnown RBP10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 MYRFLQ96LU7 910 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 EIF3CQ99613 913 aaKnown RBP10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 B3GNT5Q9BYG0 378 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 EBF3Q9H4W6 596 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 LMAN1LQ9HAT1 526 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 MAGEC2Q9UBF1 373 aaPredicted RBP10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 CEP250Q9BV73 2442 aa10.26□□□□□ -0.77
NIF3L1-202ENST00000409020 PTPRDP23468 1912 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 KIF26AQ9ULI4 1882 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 A8MXQ7 604 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 MAN2B1O00754 1011 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 LAMTOR5O43504 91 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 ECEL1O95672 775 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 MYL1P05976 194 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 TDGF1P13385 188 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms