RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 CCDC127Q96BQ5 260 aa22.46■■□□□ 1.19
CD47-202ENST00000361309 SPACA7Q96KW9 195 aa22.46■■□□□ 1.19
CD47-202ENST00000361309 CGRRF1Q99675 332 aa22.46■■□□□ 1.19
CD47-202ENST00000361309 B3GNT5Q9BYG0 378 aa22.46■■□□□ 1.19
CD47-202ENST00000361309 BCCIPQ9P287 314 aaKnown RBP eCLIP22.46■■□□□ 1.19
CD47-202ENST00000361309 EVLQ9UI08 416 aaPredicted RBP22.46■■□□□ 1.19
CD47-202ENST00000361309 CACNA1EQ15878 2313 aa22.46■■□□□ 1.19
CD47-202ENST00000361309 A8MXQ7 604 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 TGFB1I1O43294 461 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 TOP3BO95985 862 aaKnown RBP22.45■■□□□ 1.18
CD47-202ENST00000361309 FAM163BP0C2L3 166 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 YWHAQP27348 245 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 GRIA2P42262 883 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 PSMD6Q15008 389 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 TRIM61Q5EBN2 209 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 EOGTQ5NDL2 527 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 LY6G5CQ5SRR4 150 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 EPM2AIP1Q7L775 607 aaPredicted RBP22.45■■□□□ 1.18
CD47-202ENST00000361309 ZNF507Q8TCN5 953 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 HMGB4Q8WW32 186 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 TRIM9Q9C026 710 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 LRRC27Q9C0I9 530 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 AGPAT3Q9NRZ7 376 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 KBTBD4Q9NVX7 518 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 TBC1D14Q9P2M4 693 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 MBD1Q9UIS9 605 aaPredicted RBP22.45■■□□□ 1.18
CD47-202ENST00000361309 ZMIZ1Q9ULJ6 1067 aa22.45■■□□□ 1.18
CD47-202ENST00000361309 TNFRSF10BO14763 440 aa22.44■■□□□ 1.18
CD47-202ENST00000361309 CLIC2O15247 247 aa22.44■■□□□ 1.18
CD47-202ENST00000361309 ADAM23O75077 832 aa22.44■■□□□ 1.18
CD47-202ENST00000361309 PTGER3P43115 390 aa22.44■■□□□ 1.18
CD47-202ENST00000361309 TNFRSF4P43489 277 aa22.44■■□□□ 1.18
CD47-202ENST00000361309 CYP2J2P51589 502 aa22.44■■□□□ 1.18
CD47-202ENST00000361309 CYP24A1Q07973 514 aa22.44■■□□□ 1.18
CD47-202ENST00000361309 LMAN2Q12907 356 aa22.44■■□□□ 1.18
CD47-202ENST00000361309 NUP93Q8N1F7 819 aa22.44■■□□□ 1.18
CD47-202ENST00000361309 PHTF2Q8N3S3 785 aa22.44■■□□□ 1.18
CD47-202ENST00000361309 B3GALNT2Q8NCR0 500 aa22.44■■□□□ 1.18
CD47-202ENST00000361309 DEFB124Q8NES8 71 aa22.44■■□□□ 1.18
CD47-202ENST00000361309 FBXO32Q969P5 355 aa22.44■■□□□ 1.18
CD47-202ENST00000361309 NUSAP1Q9BXS6 441 aaKnown RBP22.44■■□□□ 1.18
CD47-202ENST00000361309 TMEM74BQ9NUR3 256 aa22.44■■□□□ 1.18
CD47-202ENST00000361309 NXF1Q9UBU9 619 aaKnown RBP22.44■■□□□ 1.18
CD47-202ENST00000361309 TCRBV21S2A2A0A5A6 115 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 E2F8A0AVK6 867 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.43■■□□□ 1.18
CD47-202ENST00000361309 COCHO43405 550 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 RTN3O95197 1032 aaPredicted RBP22.43■■□□□ 1.18
CD47-202ENST00000361309 MYL6P60660 151 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 ASIC1P78348 528 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 TRPC3Q13507 836 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 E2F4Q16254 413 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 MAP7D1Q3KQU3 841 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 SYT12Q8IV01 421 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 PGBD3Q8N328 593 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 NAT16Q8N8M0 369 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 ZNF516Q92618 1163 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 ZFRQ96KR1 1074 aaKnown RBP22.43■■□□□ 1.18
CD47-202ENST00000361309 KCNK16Q96T55 309 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 CHORDC1Q9UHD1 332 aaPredicted RBP22.43■■□□□ 1.18
CD47-202ENST00000361309 MTMR6Q9Y217 621 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 SPEGQ15772 3267 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 WDFY3Q8IZQ1 3526 aa22.43■■□□□ 1.18
CD47-202ENST00000361309 ATXN2Q99700 1313 aaKnown RBP22.42■■□□□ 1.18
CD47-202ENST00000361309 MAPK8P45983 427 aa22.42■■□□□ 1.18
CD47-202ENST00000361309 NASPP49321 788 aaPredicted RBP22.42■■□□□ 1.18
CD47-202ENST00000361309 GAD2Q05329 585 aa22.42■■□□□ 1.18
CD47-202ENST00000361309 BYSLQ13895 437 aaKnown RBP22.42■■□□□ 1.18
CD47-202ENST00000361309 STK38Q15208 465 aa22.42■■□□□ 1.18
CD47-202ENST00000361309 FAM26FQ5R3K3 315 aa22.42■■□□□ 1.18
CD47-202ENST00000361309 NELFCDQ8IXH7 590 aa22.42■■□□□ 1.18
CD47-202ENST00000361309 XXYLT1Q8NBI6 393 aa22.42■■□□□ 1.18
CD47-202ENST00000361309 PDZD8Q8NEN9 1154 aa22.42■■□□□ 1.18
CD47-202ENST00000361309 OVCA2Q8WZ82 227 aa22.42■■□□□ 1.18
CD47-202ENST00000361309 OTUB2Q96DC9 234 aa22.42■■□□□ 1.18
CD47-202ENST00000361309 ADAM33Q9BZ11 813 aa22.42■■□□□ 1.18
CD47-202ENST00000361309 GZF1Q9H116 711 aaPredicted RBP22.42■■□□□ 1.18
CD47-202ENST00000361309 TBC1D3BA6NDS4 549 aa22.41■■□□□ 1.18
CD47-202ENST00000361309 STAU1O95793 577 aaKnown RBP22.41■■□□□ 1.18
CD47-202ENST00000361309 ENGP17813 658 aa22.41■■□□□ 1.18
CD47-202ENST00000361309 AMPD3Q01432 767 aa22.41■■□□□ 1.18
CD47-202ENST00000361309 HECTD3Q5T447 861 aa22.41■■□□□ 1.18
CD47-202ENST00000361309 LYSMD4Q5XG99 296 aa22.41■■□□□ 1.18
CD47-202ENST00000361309 ETFBKMTQ8IXQ9 262 aa22.41■■□□□ 1.18
CD47-202ENST00000361309 KDF1Q8NAX2 398 aaPredicted RBP22.41■■□□□ 1.18
CD47-202ENST00000361309 SCAMP5Q8TAC9 235 aa22.41■■□□□ 1.18
CD47-202ENST00000361309 DHX58Q96C10 678 aa22.41■■□□□ 1.18
CD47-202ENST00000361309 SCNM1Q9BWG6 230 aa22.41■■□□□ 1.18
CD47-202ENST00000361309 TMEM121BQ9BXQ6 578 aaPredicted RBP22.41■■□□□ 1.18
CD47-202ENST00000361309 XYLT2Q9H1B5 865 aa22.41■■□□□ 1.18
CD47-202ENST00000361309 CUEDC2Q9H467 287 aa22.41■■□□□ 1.18
CD47-202ENST00000361309 CCSER2Q9H7U1 834 aa22.41■■□□□ 1.18
CD47-202ENST00000361309 SH3BP1Q9Y3L3 701 aa22.41■■□□□ 1.18
CD47-202ENST00000361309 ZFYVE26Q68DK2 2539 aa22.4■■□□□ 1.18
CD47-202ENST00000361309 ATICP31939 592 aa22.4■■□□□ 1.18
CD47-202ENST00000361309 CDH8P55286 799 aa22.4■■□□□ 1.18
CD47-202ENST00000361309 SPDYCQ5MJ68 293 aa22.4■■□□□ 1.18
CD47-202ENST00000361309 BTBD8Q5XKL5 378 aa22.4■■□□□ 1.18
CD47-202ENST00000361309 FAM35AQ86V20 835 aa22.4■■□□□ 1.18
CD47-202ENST00000361309 BBS7Q8IWZ6 715 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms