RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 SPTLC1O15269 473 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 UPP2O95045 317 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 GH2P01242 217 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 ATP5BP06576 529 aaKnown RBP5.9□□□□□ -1.47
VCAN-201ENST00000265077 CLK1P49759 484 aaKnown RBP5.9□□□□□ -1.47
VCAN-201ENST00000265077 ARMC4Q5T2S8 1044 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 TTC39BQ5VTQ0 682 aaPredicted RBP5.9□□□□□ -1.47
VCAN-201ENST00000265077 CCDC149Q6ZUS6 474 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 MTDHQ86UE4 582 aaKnown RBP5.9□□□□□ -1.47
VCAN-201ENST00000265077 ARHGEF26Q96DR7 871 aa5.9□□□□□ -1.47
VCAN-201ENST00000265077 ROBO2Q9HCK4 1378 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 NMT2O60551 498 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 SLC27A3Q5K4L6 730 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 TSEN2Q8NCE0 465 aaKnown RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 OR6Y1Q8NGX8 325 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 SPIRE2Q8WWL2 714 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 DDX50Q9BQ39 737 aaKnown RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 KLHL31Q9H511 634 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 USP21Q9UK80 565 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 PHTF1Q9UMS5 762 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 HPS5Q9UPZ3 1129 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 TRIOBPQ9H2D6 2365 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 STMND1H3BQB6 276 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 M0QX08 132 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 ZBTB11O95625 1053 aaPredicted RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 COMTP21964 271 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 SF3B3Q15393 1217 aaKnown RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 FIGNQ5HY92 759 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 STOX1Q6ZVD7 989 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 TMPRSS6Q8IU80 811 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 MICU2Q8IYU8 434 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 S100ZQ8WXG8 99 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 L3MBTL3Q96JM7 780 aaPredicted RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 CNPY3Q9BT09 278 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 SCN3BQ9NY72 215 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 AKAP12Q02952 1782 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 CRB1P82279 1406 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 FOXN1O15353 648 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 IFNA16P05015 189 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 TMEM253P0C7T8 217 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 GSSP48637 474 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 GNG2P59768 71 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 SNRNP35Q16560 246 aaKnown RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 ZFP69Q49AA0 526 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 ATG14Q6ZNE5 492 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 UNC45BQ8IWX7 931 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 SYTL5Q8TDW5 730 aaPredicted RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 PIGBQ92521 554 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 NAT9Q9BTE0 207 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 HEY2Q9UBP5 337 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 UNC13CQ8NB66 2214 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 OVOS2A0A0G2JMS6 1433 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 P4HBP07237 508 aaKnown RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 CPA3P15088 417 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 EFL1Q7Z2Z2 1120 aaKnown RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 ADGRF4Q8IZF3 695 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 PGBD4Q96DM1 585 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 KIAA1683Q9H0B3 1180 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 TMEM8AQ9HCN3 771 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 SCAF8Q9UPN6 1271 aaKnown RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 PRR23D1E9PI22 279 aaPredicted RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 PIK3CDO00329 1044 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 PRR23D2P0DMB1 279 aaPredicted RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 FXR2P51116 673 aaKnown RBP eCLIP5.89□□□□□ -1.474e-8■■■■■ 35.7
VCAN-201ENST00000265077 C16orf62Q7Z3J2 963 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 SRBD1Q8N5C6 995 aaKnown RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 TPCN2Q8NHX9 752 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 RNASE11Q8TAA1 199 aaKnown RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 GLMNQ92990 594 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 NEUROG2Q9H2A3 272 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 SPTA1P02549 2419 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 PRAMEF22A3QJZ6 481 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 CBX6O95503 412 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 POU5F1BQ06416 359 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 RUNX1T1Q06455 604 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 ZNF846Q147U1 533 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 ZNF423Q2M1K9 1284 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 PERM1Q5SV97 790 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 SPATA18Q8TC71 538 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 FNDC8Q8TC99 324 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 NSUN6Q8TEA1 469 aaKnown RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.89□□□□□ -1.47
VCAN-201ENST00000265077 ZNF221Q9UK13 617 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 GIT1Q9Y2X7 761 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 TMEM98Q9Y2Y6 226 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 CCRL2O00421 344 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 AIM2O14862 343 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 LZTS3O60299 673 aaPredicted RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 MDH1BQ5I0G3 518 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 NET1Q7Z628 596 aaPredicted RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 CCNJLQ8IV13 435 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 EFHBQ8N7U6 833 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 E2F7Q96AV8 911 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 DNAJC7Q99615 494 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 ZNF304Q9HCX3 659 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 MAGED2Q9UNF1 606 aaPredicted RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 PCDHA10Q9Y5I2 948 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 GAS2O43903 313 aaKnown RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 DGAT1O75907 488 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 EIF2AK2P19525 551 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms