RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 AKAP12Q02952 1782 aa4.32□□□□□ -1.72
CDC27-213ENST00000571643 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.32□□□□□ -1.72
CDC27-213ENST00000571643 USP6P35125 1406 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 SSH2Q76I76 1423 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 CPDO75976 1380 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 ADGRA2Q96PE1 1338 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 LRRC3CA6NJW4 275 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 LINC00473A8K010 186 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 IL33O95760 270 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 LPOP22079 712 aaPredicted RBP4.31□□□□□ -1.72
CDC27-213ENST00000571643 RBM6P78332 1123 aaKnown RBP4.31□□□□□ -1.72
CDC27-213ENST00000571643 SATB1Q01826 763 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 SLC10A2Q12908 348 aaPredicted RBP4.31□□□□□ -1.72
CDC27-213ENST00000571643 BIRC2Q13490 618 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 BMPR2Q13873 1038 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 PGS1Q32NB8 556 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 PLEKHG6Q3KR16 790 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 ZNF618Q5T7W0 954 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 FCRLBQ6BAA4 426 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 SLC30A10Q6XR72 485 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 KRBA2Q6ZNG9 492 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 ZNF551Q7Z340 670 aaPredicted RBP4.31□□□□□ -1.72
CDC27-213ENST00000571643 CNPY4Q8N129 248 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 PRR18Q8N4B5 295 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 KCNH5Q8NCM2 988 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 TNPO1Q92973 898 aaKnown RBP4.31□□□□□ -1.72
CDC27-213ENST00000571643 FKBP10Q96AY3 582 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 FAM136AQ96C01 138 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 MOGAT1Q96PD6 335 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 ACTRT3Q9BYD9 372 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.31□□□□□ -1.72
CDC27-213ENST00000571643 TRPC5Q9UL62 973 aaPredicted RBP4.31□□□□□ -1.72
CDC27-213ENST00000571643 PCDHA3Q9Y5H8 950 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 COMMD10Q9Y6G5 202 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 ABCC6O95255 1503 aa4.31□□□□□ -1.72
CDC27-213ENST00000571643 EDC4Q6P2E9 1401 aaKnown RBP4.3□□□□□ -1.72
CDC27-213ENST00000571643 COL14A1Q05707 1796 aaKnown RBP4.3□□□□□ -1.72
CDC27-213ENST00000571643 MON2Q7Z3U7 1717 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 USP19O94966 1318 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 USP54Q70EL1 1684 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 S100BP04271 92 aaPredicted RBP4.3□□□□□ -1.72
CDC27-213ENST00000571643 HSP90AA1P07900 732 aaKnown RBP4.3□□□□□ -1.72
CDC27-213ENST00000571643 TYRP14679 529 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 ZFXP17010 805 aaPredicted RBP4.3□□□□□ -1.72
CDC27-213ENST00000571643 EVA1CP58658 441 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 EXOSC10Q01780 885 aaKnown RBP4.3□□□□□ -1.72
CDC27-213ENST00000571643 FOXF2Q12947 444 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 CCDC157Q569K6 752 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 RBM20Q5T481 1227 aaKnown RBP4.3□□□□□ -1.72
CDC27-213ENST00000571643 EMC10Q5UCC4 262 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 FAM160B1Q5W0V3 765 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 TAF2Q6P1X5 1199 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 CLEC4GQ6UXB4 293 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 PPP1R32Q7Z5V6 425 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 FAM109AQ8N4B1 249 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 HSPBAP1Q96EW2 488 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 LRIG1Q96JA1 1093 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 C1orf43Q9BWL3 253 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 MRPL46Q9H2W6 279 aaKnown RBP4.3□□□□□ -1.72
CDC27-213ENST00000571643 TCF7L1Q9HCS4 588 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 IL17RBQ9NRM6 502 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 TYW1Q9NV66 732 aaKnown RBP4.3□□□□□ -1.72
CDC27-213ENST00000571643 RGS17Q9UGC6 210 aaPredicted RBP4.3□□□□□ -1.72
CDC27-213ENST00000571643 LUC7L2Q9Y383 392 aaKnown RBP4.3□□□□□ -1.72
CDC27-213ENST00000571643 LRP6O75581 1613 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 SLIT2O94813 1529 aa4.3□□□□□ -1.72
CDC27-213ENST00000571643 ABCA3Q99758 1704 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 CRYBG1Q9Y4K1 1723 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 KTN1Q86UP2 1357 aaKnown RBP4.29□□□□□ -1.72
CDC27-213ENST00000571643 ANKRD36BQ8N2N9 1353 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 AFF2P51816 1311 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 TTC21BQ7Z4L5 1316 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 M0QYG6 137 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 TLR5O60602 858 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 ONECUT2O95948 504 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 PRKCGP05129 697 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 POU2F2P09086 479 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 ATXN1LP0C7T5 689 aaKnown RBP4.29□□□□□ -1.72
CDC27-213ENST00000571643 NDUFB7P17568 137 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 DRD4P21917 467 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 PAX3P23760 479 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 GCLCP48506 637 aaPredicted RBP4.29□□□□□ -1.72
CDC27-213ENST00000571643 CCT8P50990 548 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 NEK2P51955 445 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 TBX4P57082 545 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 LOXL3P58215 753 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 PROK1P58294 105 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 CEP85Q6P2H3 762 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 ANKRD16Q6P6B7 361 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 LAYNQ6UX15 382 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 USP37Q86T82 979 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 UNC5CLQ8IV45 518 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 FAM9BQ8IZU0 186 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 TBC1D5Q92609 795 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 EVI5LQ96CN4 794 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 CDK5RAP3Q96JB5 506 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 CNNM1Q9NRU3 951 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 PNPOQ9NVS9 261 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 GABBR1Q9UBS5 961 aa4.29□□□□□ -1.72
CDC27-213ENST00000571643 PNMA2Q9UL42 364 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms