RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 NUB1Q9Y5A7 615 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 DUOX1Q9NRD9 1551 aa10.62□□□□□ -0.71
SMARCC2-209ENST00000550164 FKBP6O75344 327 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 SUPT3HO75486 399 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 CAP2P40123 477 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 BLMHQ13867 455 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 TMEM161BQ8NDZ6 487 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 CXorf38Q8TB03 319 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 TEX13BQ9BXU2 312 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 ZNF212Q9UDV6 495 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 CHKBQ9Y259 395 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 CDY2AQ9Y6F7 541 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 CDY1Q9Y6F8 540 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 OATP04181 439 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 ITGB3P05106 788 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 ALADP13716 330 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 RPL22P35268 128 aaKnown RBP10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 TBCCQ15814 346 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 SLC15A2Q16348 729 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 BOLA3Q53S33 107 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 HABP4Q5JVS0 413 aaKnown RBP10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 RNF220Q5VTB9 566 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 DENND5BQ6ZUT9 1274 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 KDELC2Q7Z4H8 507 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 ALLCQ8N6M5 410 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 CATSPER1Q8NEC5 780 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 IL31RAQ8NI17 732 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 PPP2R3CQ969Q6 453 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 VPS39Q96JC1 886 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 MTFR1LQ9H019 292 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 ZNF408Q9H9D4 720 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 ARHGEF3Q9NR81 526 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 RPS6KL1Q9Y6S9 549 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 XPOTO43592 962 aaKnown RBP10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 PDGFRBP09619 1106 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 ECHS1P30084 290 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 TNFAIP2Q03169 654 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 ATF7IP2Q5U623 682 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 KLC3Q6P597 504 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 LAYNQ6UX15 382 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 ARMCX2Q7L311 632 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 RTKN2Q8IZC4 609 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 CCT7Q99832 543 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 FRMD8Q9BZ67 464 aaPredicted RBP10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 KLHL4Q9C0H6 718 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 CAAP1Q9H8G2 361 aa10.61□□□□□ -0.71
SMARCC2-209ENST00000550164 OGTO15294 1046 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 MAFGO15525 162 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 PROCP04070 461 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 SOX11P35716 441 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 CDH8P55286 799 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 BST1Q10588 318 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 USP10Q14694 798 aaKnown RBP10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 PRAMEF18Q5VWM3 479 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 C16orf46Q6P387 395 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 RAB44Q7Z6P3 723 aaPredicted RBP10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 RNF148Q8N7C7 305 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 RDM1Q8NG50 284 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 RXFP2Q8WXD0 754 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 ZNF518BQ9C0D4 1074 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 ZMYM2Q9UBW7 1377 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 MYH13Q9UKX3 1938 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 LGR5O75473 907 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 CSDE1O75534 798 aaKnown RBP10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 LSM8O95777 96 aaKnown RBP10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 CLPTM1O96005 669 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 POLBP06746 335 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 SPRP35270 261 aaPredicted RBP10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 WDR4P57081 412 aaKnown RBP10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 SLC25A3Q00325 362 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 EFHC2Q5JST6 749 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 ALYREFQ86V81 257 aaKnown RBP10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 MFN1Q8IWA4 741 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 B4GALNT2Q8NHY0 566 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 SGF29Q96ES7 293 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 SPATA33Q96N06 139 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 WARS2Q9UGM6 360 aaKnown RBP10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 SLC39A10Q9ULF5 831 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 KCPQ6ZWJ8 1503 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 GNGT2O14610 69 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 ALOX15BO15296 676 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 GLRA3O75311 464 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 FDX1P10109 184 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 CHRNB2P17787 502 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 TM4SF1P30408 202 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 HOXD13P35453 343 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 NOMO3P69849 1222 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 CYLC2Q14093 348 aaPredicted RBP10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 DPYSL3Q14195 570 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 PGM5Q15124 567 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 VPS72Q15906 364 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 N4BP2L1Q5TBK1 243 aaPredicted RBP10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 C16orf87Q6PH81 154 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 MTHFD1LQ6UB35 978 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 SEPT1Q8WYJ6 367 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 GPRASP2Q96D09 838 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 MECRQ9BV79 373 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 NT5C1AQ9BXI3 368 aa10.6□□□□□ -0.71
SMARCC2-209ENST00000550164 IPO11Q9UI26 975 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms