RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 MARCKSL1P49006 195 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 TNFAIP1Q13829 316 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 PKN2Q16513 984 aaKnown RBP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 ITPRIPL1Q6GPH6 555 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 IYDQ6PHW0 289 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 PRR23CQ6ZRP0 262 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 KCNK18Q7Z418 384 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 CLNKQ7Z7G1 428 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 SIAH1Q8IUQ4 282 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 PEX5LQ8IYB4 626 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 LRRC57Q8N9N7 239 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 HIPK4Q8NE63 616 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 FBXL8Q96CD0 374 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 DGCR14Q96DF8 476 aaKnown RBP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 PTCD3Q96EY7 689 aaKnown RBP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 FEM1CQ96JP0 617 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 CCT7Q99832 543 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 ABCG4Q9H172 646 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 SEMA6BQ9H3T3 888 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 TLE6Q9H808 572 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 HERC5Q9UII4 1024 aaKnown RBP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 COQ6Q9Y2Z9 468 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 FADS3Q9Y5Q0 445 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 CCDC163A0A0D9SF12 145 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 MYMKA6NI61 221 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 PEX10O60683 326 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 GAS7O60861 476 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 AGTP01019 485 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 TROVE2P10155 538 aaKnown RBP eCLIP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 UBL4AP11441 157 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 PABPC1P11940 636 aaKnown RBP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 HSPA6P17066 643 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 SERPINB8P50452 374 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 RASSF2P50749 326 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 HMGCS2P54868 508 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 GRM2Q14416 872 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 PSMD6Q15008 389 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 RPS6KA1Q15418 735 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 KCNJ8Q15842 424 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 DEPDC1Q5TB30 811 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 CYP4A22Q5TCH4 519 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 CHRDL2Q6WN34 429 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 LDHDQ86WU2 507 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 C4orf32Q8N8J7 132 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 RDH13Q8NBN7 331 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 C7orf57Q8NEG2 295 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 FRS2Q8WU20 508 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 RNF34Q969K3 372 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 GCNAQ96QF7 691 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 GGA3Q9NZ52 723 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 CORINQ9Y5Q5 1042 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 IGSF9BQ9UPX0 1349 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 C15orf38-AP3S2A0A0A6YYH1 394 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 CTSHP09668 335 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 DDX5P17844 614 aaKnown RBP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 HNRNPH3P31942 346 aaKnown RBP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 STX2P32856 288 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 CAP2P40123 477 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 ST13P50502 369 aaKnown RBP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 YARSP54577 528 aaKnown RBP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 PEX3P56589 373 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 PSMC1P62191 440 aaKnown RBP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 PLCB3Q01970 1234 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 RALGDSQ12967 914 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 CARTPTQ16568 116 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 TMEM259Q4ZIN3 620 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 ARSHQ5FYA8 562 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 HP1BP3Q5SSJ5 553 aaPredicted RBP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 C6orf118Q5T5N4 469 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 SPOPLQ6IQ16 392 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 CFAP161Q6P656 301 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 RIPOR1Q6ZS17 1223 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 RTL10Q7L3V2 364 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 BTLAQ7Z6A9 289 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 ARPINQ7Z6K5 226 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 UBE2Q1Q7Z7E8 422 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 ST13P4Q8IZP2 240 aaPredicted RBP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 SYT2Q8N9I0 419 aaPredicted RBP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 INPP5DQ92835 1189 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 HLA-CQ95604 372 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 TSG101Q99816 390 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 SLC39A3Q9BRY0 314 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 DCUN1D5Q9BTE7 237 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 EHD1Q9H4M9 534 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 AJAP1Q9UKB5 411 aaPredicted RBP6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 PACSIN3Q9UKS6 424 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 DNM3Q9UQ16 869 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 CASZ1Q86V15 1759 aa6.03□□□□□ -1.44
SOX2-OT-218ENST00000498731 SH3PXD2BA1X283 911 aa6.02□□□□□ -1.45
SOX2-OT-218ENST00000498731 IQCA1LA6NCM1 817 aa6.02□□□□□ -1.45
SOX2-OT-218ENST00000498731 MEI4A8MW99 385 aa6.02□□□□□ -1.45
SOX2-OT-218ENST00000498731 A8MX80 341 aa6.02□□□□□ -1.45
SOX2-OT-218ENST00000498731 TBCAO75347 108 aaKnown RBP6.02□□□□□ -1.45
SOX2-OT-218ENST00000498731 TRMUO75648 421 aaKnown RBP6.02□□□□□ -1.45
SOX2-OT-218ENST00000498731 PLA2G4BP0C869 781 aa6.02□□□□□ -1.45
SOX2-OT-218ENST00000498731 ACTN1P12814 892 aa6.02□□□□□ -1.45
SOX2-OT-218ENST00000498731 VCLP18206 1134 aa6.02□□□□□ -1.45
SOX2-OT-218ENST00000498731 DNAJB2P25686 324 aa6.02□□□□□ -1.45
SOX2-OT-218ENST00000498731 CRABP2P29373 138 aa6.02□□□□□ -1.45
SOX2-OT-218ENST00000498731 SLC5A3P53794 718 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms