RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 USP20Q9Y2K6 914 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 BACE2Q9Y5Z0 518 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 CLUHO75153 1309 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 TEX15Q9BXT5 2789 aa7.41□□□□□ -1.22
CLDN4-204ENST00000466411 NOTCH4Q99466 2003 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.4□□□□□ -1.22
CLDN4-204ENST00000466411 LRRIQ3A6PVS8 624 aaPredicted RBP7.4□□□□□ -1.22
CLDN4-204ENST00000466411 GOLGA6L19H0YKK7 550 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 HYAL3O43820 417 aaPredicted RBP7.4□□□□□ -1.22
CLDN4-204ENST00000466411 CLSTN1O94985 981 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 OAZ2O95190 189 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 EFEMP2O95967 443 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 AFPP02771 609 aaKnown RBP7.4□□□□□ -1.22
CLDN4-204ENST00000466411 CEACAM1P13688 526 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 FGFR3P22607 806 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 POLR2BP30876 1174 aaKnown RBP7.4□□□□□ -1.22
CLDN4-204ENST00000466411 HOXC13P31276 330 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 CNR2P34972 360 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 MTIF2P46199 727 aaKnown RBP7.4□□□□□ -1.22
CLDN4-204ENST00000466411 RAP1GAPP47736 663 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 ZNF165P49910 485 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 TSPY1Q01534 308 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 PLD1Q13393 1074 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 GAS6Q14393 721 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 PSMD5Q16401 504 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 NFE2Q16621 373 aaPredicted RBP7.4□□□□□ -1.22
CLDN4-204ENST00000466411 MAN2A1Q16706 1144 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 ZNF699Q32M78 642 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 ZSCAN23Q3MJ62 389 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 DCAF17Q5H9S7 520 aaPredicted RBP7.4□□□□□ -1.22
CLDN4-204ENST00000466411 ZNF667Q5HYK9 610 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 SH3PXD2AQ5TCZ1 1133 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 FAM171A1Q5VUB5 890 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 ISM2Q6H9L7 571 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 TRIM59Q8IWR1 403 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 EFCAB13Q8IY85 973 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 C1orf127Q8N9H9 656 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 C18orf25Q96B23 403 aaPredicted RBP7.4□□□□□ -1.22
CLDN4-204ENST00000466411 HPDLQ96IR7 371 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 TNIP3Q96KP6 325 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 CNOT6LQ96LI5 555 aaKnown RBP7.4□□□□□ -1.22
CLDN4-204ENST00000466411 CEP295NLQ96MC4 621 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 ARRDC1-AS1Q9H2J1 176 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 PLEKHA4Q9H4M7 779 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 CYP3A43Q9HB55 503 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 RXFP1Q9HBX9 757 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 MARCH5Q9NX47 278 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 MIOSQ9NXC5 875 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.4□□□□□ -1.22
CLDN4-204ENST00000466411 AGAP1Q9UPQ3 857 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 COQ4Q9Y3A0 265 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 NFE2L3Q9Y4A8 694 aa7.4□□□□□ -1.22
CLDN4-204ENST00000466411 ANKRD17O75179 2603 aaKnown RBP7.39□□□□□ -1.23
CLDN4-204ENST00000466411 COL6A6A6NMZ7 2263 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 EML5Q05BV3 1969 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 ATP8B3O60423 1300 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 CCDC195A0A1B0GUA6 201 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 SYCE3A1L190 88 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 TRIM49BA6NDI0 452 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 CHURC1-FNTBB4DL54 471 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 NT5C1B-RDH14C9J2C7 533 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 K7ESF4 209 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 ARHGAP6O43182 974 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 TACC1O75410 805 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 GLUD1P00367 558 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 ASS1P00966 412 aaKnown RBP7.39□□□□□ -1.23
CLDN4-204ENST00000466411 POU2F2P09086 479 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 CNPP09543 421 aaKnown RBP7.39□□□□□ -1.23
CLDN4-204ENST00000466411 FBXO45P0C2W1 286 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 CDK11BP21127 795 aaKnown RBP7.39□□□□□ -1.23
CLDN4-204ENST00000466411 CSRP1P21291 193 aaKnown RBP7.39□□□□□ -1.23
CLDN4-204ENST00000466411 CA8P35219 290 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 FMO5P49326 533 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 FNTBP49356 437 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 CASP4P49662 377 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 AFF1P51825 1210 aaKnown RBP7.39□□□□□ -1.23
CLDN4-204ENST00000466411 SOX4Q06945 474 aaPredicted RBP7.39□□□□□ -1.23
CLDN4-204ENST00000466411 ADCY1Q08828 1119 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 UVSSAQ2YD98 709 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 ANO6Q4KMQ2 910 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 FILIP1LQ4L180 1135 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 FKBP15Q5T1M5 1219 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 TDRD10Q5VZ19 366 aaKnown RBP7.39□□□□□ -1.23
CLDN4-204ENST00000466411 OVOS1Q6IE37 1185 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 SLC8B1Q6J4K2 584 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 SV2AQ7L0J3 742 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.39□□□□□ -1.23
CLDN4-204ENST00000466411 UNC93AQ86WB7 457 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 DCP1BQ8IZD4 617 aaKnown RBP7.39□□□□□ -1.23
CLDN4-204ENST00000466411 FAM200AQ8TCP9 573 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 BCL7CQ8WUZ0 217 aaPredicted RBP7.39□□□□□ -1.23
CLDN4-204ENST00000466411 SLC35C1Q96A29 364 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 IQCDQ96DY2 449 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 SENP8Q96LD8 212 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 DUSP9Q99956 384 aaKnown RBP7.39□□□□□ -1.23
CLDN4-204ENST00000466411 GOLGA2P5Q9HBQ8 144 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 RAB20Q9NX57 234 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 EHD2Q9NZN4 543 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 MTRRQ9UBK8 725 aa7.39□□□□□ -1.23
CLDN4-204ENST00000466411 SCN1AP35498 2009 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms