RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 APBB1IPQ7Z5R6 666 aaPredicted RBP6.23□□□□□ -1.41
VPS36-202ENST00000462289 HID1Q8IV36 788 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 CD302Q8IX05 232 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 ADSSL1Q8N142 457 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 TRIML1Q8N9V2 468 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 ZSWIM2Q8NEG5 633 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 COX4I2Q96KJ9 171 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 HSPA12BQ96MM6 686 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 MED15Q96RN5 788 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 MIPEPQ99797 713 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 CBWD1Q9BRT8 395 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 C11orf84Q9BUA3 381 aaPredicted RBP6.23□□□□□ -1.41
VPS36-202ENST00000462289 CLSTN2Q9H4D0 955 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 CHST7Q9NS84 486 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 C19orf73Q9NVV2 129 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 SNTG2Q9NY99 539 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 DNAJB4Q9UDY4 337 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 STK39Q9UEW8 545 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 EXOC7Q9UPT5 735 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 STXBP5LQ9Y2K9 1186 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 C2CD2Q9Y426 696 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 MTCH2Q9Y6C9 303 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 CAPN6Q9Y6Q1 641 aa6.23□□□□□ -1.41
VPS36-202ENST00000462289 LRRC10BA6NIK2 292 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 TBKBP1A7MCY6 615 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 GFRA2O00451 464 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 PIRO00625 290 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 GRM6O15303 877 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 EXTL3O43909 919 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 TBC1D4O60343 1298 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 PRPF40AO75400 957 aaKnown RBP6.22□□□□□ -1.41
VPS36-202ENST00000462289 LDHAP00338 332 aaKnown RBP6.22□□□□□ -1.41
VPS36-202ENST00000462289 CXCL8P10145 99 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 AKAP5P24588 427 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 TNFSF9P41273 254 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 SLC11A1P49279 550 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 LIG4P49917 911 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 SCNN1GP51170 649 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 BCAR1P56945 870 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 WIPI1Q5MNZ9 446 aaPredicted RBP6.22□□□□□ -1.41
VPS36-202ENST00000462289 C1orf220Q5T0J3 134 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 SPATA1Q5VX52 437 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 SPOCD1Q6ZMY3 1216 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 C15orf39Q6ZRI6 1047 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 STXBP4Q6ZWJ1 553 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 Q7L0L9 218 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 THAP5Q7Z6K1 395 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 DDX53Q86TM3 631 aaKnown RBP6.22□□□□□ -1.41
VPS36-202ENST00000462289 EFCAB13Q8IY85 973 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 HACE1Q8IYU2 909 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 DEFB123Q8N688 67 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 RIN3Q8TB24 985 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 GOLGA5Q8TBA6 731 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 PLEKHO2Q8TD55 490 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 MRPL38Q96DV4 380 aaKnown RBP6.22□□□□□ -1.41
VPS36-202ENST00000462289 IGSF21Q96ID5 467 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 UROC1Q96N76 676 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 ACAP3Q96P50 834 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 GBP4Q96PP9 640 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 CDX2Q99626 313 aaPredicted RBP6.22□□□□□ -1.41
VPS36-202ENST00000462289 PAAF1Q9BRP4 392 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 CCDC94Q9BW85 323 aaPredicted RBP6.22□□□□□ -1.41
VPS36-202ENST00000462289 ZBP1Q9H171 429 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 CARS2Q9HA77 564 aaKnown RBP6.22□□□□□ -1.41
VPS36-202ENST00000462289 KIAA1586Q9HCI6 787 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 ATP13A1Q9HD20 1204 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 SLC39A2Q9NP94 309 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 TOPORSQ9NS56 1045 aaPredicted RBP6.22□□□□□ -1.41
VPS36-202ENST00000462289 EXOC1Q9NV70 894 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 RMND1Q9NWS8 449 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 TBC1D7Q9P0N9 293 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 MAN1B1Q9UKM7 699 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 AGO2Q9UKV8 859 aaKnown RBP6.22□□□□□ -1.41
VPS36-202ENST00000462289 GDAQ9Y2T3 454 aa6.22□□□□□ -1.41
VPS36-202ENST00000462289 PATJQ8NI35 1801 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 ZNF638Q14966 1978 aaKnown RBP6.21□□□□□ -1.42
VPS36-202ENST00000462289 GOLGA6L4A6NEF3 574 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 LACTBL1A8MY62 500 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 M0QZQ0 153 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 NRP1O14786 923 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 PMM2O15305 246 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 KINO60870 393 aaKnown RBP6.21□□□□□ -1.42
VPS36-202ENST00000462289 FGF18O76093 207 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 IL18RAPO95256 599 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 CST3P01034 146 aaPredicted RBP6.21□□□□□ -1.42
VPS36-202ENST00000462289 THP07101 528 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 CTSAP10619 480 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 PAX3P23760 479 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 IGFBP6P24592 240 aaPredicted RBP6.21□□□□□ -1.42
VPS36-202ENST00000462289 RPL9P32969 192 aaKnown RBP6.21□□□□□ -1.42
VPS36-202ENST00000462289 MCM4P33991 863 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 GDNFP39905 211 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 PPP1R2P41236 205 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 PRCPP42785 496 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 ETF1P62495 437 aaKnown RBP6.21□□□□□ -1.42
VPS36-202ENST00000462289 MRPL58Q14197 206 aaKnown RBP6.21□□□□□ -1.42
VPS36-202ENST00000462289 PSMD6Q15008 389 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 CT47A1Q5JQC4 288 aaPredicted RBP6.21□□□□□ -1.42
VPS36-202ENST00000462289 FYB2Q5VWT5 728 aa6.21□□□□□ -1.42
VPS36-202ENST00000462289 TTI2Q6NXR4 508 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms