RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 PSMD13Q9UNM6 376 aa19.42■□□□□ 0.7
PTPA-223ENST00000452489 LAMB1P07942 1786 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 UBR2Q8IWV8 1755 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 ESYT2A0FGR8 921 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 DGKIO75912 1065 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 NDST2P52849 883 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 COPAP53621 1224 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 MSS51Q4VC12 460 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 NIPAL1Q6NVV3 410 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 XKR5Q6UX68 686 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 DNAJC10Q8IXB1 793 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 NSUN4Q96CB9 384 aaKnown RBP19.41■□□□□ 0.7
PTPA-223ENST00000452489 HAUS8Q9BT25 410 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 OLFML3Q9NRN5 406 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 DNPEPQ9ULA0 475 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 CNOT3O75175 753 aaKnown RBP19.41■□□□□ 0.7
PTPA-223ENST00000452489 GZMAP12544 262 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 NMT1P30419 496 aaKnown RBP19.41■□□□□ 0.7
PTPA-223ENST00000452489 ARPC4P59998 168 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 FMO1Q01740 532 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 CYP2A13Q16696 494 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 RARS2Q5T160 578 aaKnown RBP19.41■□□□□ 0.7
PTPA-223ENST00000452489 LLGL2Q6P1M3 1020 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 C7orf26Q96N11 449 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 WDR83Q9BRX9 315 aaKnown RBP19.41■□□□□ 0.7
PTPA-223ENST00000452489 ANLNQ9NQW6 1124 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 C6orf203Q9P0P8 240 aaPredicted RBP19.41■□□□□ 0.7
PTPA-223ENST00000452489 MAST2Q6P0Q8 1798 aa19.41■□□□□ 0.7
PTPA-223ENST00000452489 SDR42E2A6NKP2 422 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 ZMPSTE24O75844 475 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 FBXO21O94952 628 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 PABPC1P11940 636 aaKnown RBP19.4■□□□□ 0.7
PTPA-223ENST00000452489 TKTP29401 623 aaKnown RBP19.4■□□□□ 0.7
PTPA-223ENST00000452489 HMOX2P30519 316 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 ZNF829Q3KNS6 432 aaPredicted RBP19.4■□□□□ 0.7
PTPA-223ENST00000452489 EGFLAMQ63HQ2 1017 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 C16orf87Q6PH81 154 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 CATSPER3Q86XQ3 398 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 CLVS1Q8IUQ0 354 aaPredicted RBP19.4■□□□□ 0.7
PTPA-223ENST00000452489 RAVER1Q8IY67 606 aaKnown RBP19.4■□□□□ 0.7
PTPA-223ENST00000452489 LRGUKQ96M69 825 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 HGH1Q9BTY7 390 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 PPME1Q9Y570 386 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 KLF11O14901 512 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 CSDE1O75534 798 aaKnown RBP19.4■□□□□ 0.7
PTPA-223ENST00000452489 CD58P19256 250 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 DLG4P78352 724 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 CHI3L2Q15782 390 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 ZBTB46Q86UZ6 589 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 DZIP1Q86YF9 867 aaKnown RBP19.4■□□□□ 0.7
PTPA-223ENST00000452489 RPGRQ92834 1020 aaKnown RBP19.4■□□□□ 0.7
PTPA-223ENST00000452489 SLC2A11Q9BYW1 496 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 ACSS3Q9H6R3 686 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 KLHL11Q9NVR0 708 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 RNF11Q9Y3C5 154 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 IVNS1ABPQ9Y6Y0 642 aa19.4■□□□□ 0.7
PTPA-223ENST00000452489 J3QRK9 145 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 CYB561D2O14569 222 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 ITGAXP20702 1163 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 SEPT6Q14141 434 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 RNASEH2BQ5TBB1 312 aaKnown RBP19.39■□□□□ 0.69
PTPA-223ENST00000452489 LMBRD2Q68DH5 695 aaPredicted RBP19.39■□□□□ 0.69
PTPA-223ENST00000452489 SPOPLQ6IQ16 392 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 TPTE2Q6XPS3 522 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 FBXW8Q8N3Y1 598 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 CABLES1Q8TDN4 633 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 CHPT1Q8WUD6 406 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 C12orf43Q96C57 262 aaKnown RBP19.39■□□□□ 0.69
PTPA-223ENST00000452489 FBXL8Q96CD0 374 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 ISOC1Q96CN7 298 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 COPS7BQ9H9Q2 264 aaPredicted RBP19.39■□□□□ 0.69
PTPA-223ENST00000452489 TMA7Q9Y2S6 64 aaKnown RBP19.39■□□□□ 0.69
PTPA-223ENST00000452489 NUB1Q9Y5A7 615 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 KIAA1551Q9HCM1 1747 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 ZNF804BA4D1E1 1349 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 CCDC162PA2VCL2 907 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 PSMD12O00232 456 aaPredicted RBP19.39■□□□□ 0.69
PTPA-223ENST00000452489 ATP2A1O14983 1001 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 CDH15P55291 814 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 RPS3AP61247 264 aaKnown RBP19.39■□□□□ 0.69
PTPA-223ENST00000452489 FNBP1LQ5T0N5 605 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 KRT27Q7Z3Y8 459 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 TICAM1Q8IUC6 712 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 ATP2A3Q93084 1043 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 E2F7Q96AV8 911 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 TRIM56Q9BRZ2 755 aaKnown RBP19.39■□□□□ 0.69
PTPA-223ENST00000452489 OSBPL10Q9BXB5 764 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 NUF2Q9BZD4 464 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 TMEM117Q9H0C3 514 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 VPS51Q9UID3 782 aa19.39■□□□□ 0.69
PTPA-223ENST00000452489 FRMPD2Q68DX3 1309 aaPredicted RBP19.38■□□□□ 0.69
PTPA-223ENST00000452489 UGT1A9O60656 530 aa19.38■□□□□ 0.69
PTPA-223ENST00000452489 UGT1A6P19224 532 aa19.38■□□□□ 0.69
PTPA-223ENST00000452489 UGT1A1P22309 533 aa19.38■□□□□ 0.69
PTPA-223ENST00000452489 UGT1A4P22310 534 aa19.38■□□□□ 0.69
PTPA-223ENST00000452489 PRDX6P30041 224 aa19.38■□□□□ 0.69
PTPA-223ENST00000452489 UGT1A3P35503 534 aa19.38■□□□□ 0.69
PTPA-223ENST00000452489 UGT1A5P35504 534 aa19.38■□□□□ 0.69
PTPA-223ENST00000452489 PEX3P56589 373 aa19.38■□□□□ 0.69
PTPA-223ENST00000452489 FAAP100Q0VG06 881 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms