RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 TRIM49D1C9J1S8 452 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 I3L4J1 428 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 CYB561D2O14569 222 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 KLF11O14901 512 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 ENTPD3O75355 529 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 AVILO75366 819 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 SPDYE6P0CI01 402 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 IL1R2P27930 398 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 LIG4P49917 911 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 AQP5P55064 265 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 ARHGAP8P85298 464 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 SPDYE2Q495Y8 402 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 CFAP157Q5JU67 520 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 HAPLN2Q9GZV7 340 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 STK32BQ9NY57 414 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 RGPD3A6NKT7 1758 aaPredicted RBP22.18■■□□□ 1.14
USP48-205ENST00000421625 RGPD4Q7Z3J3 1758 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 TCP10L2B9ZVM9 353 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 UBAP2LQ14157 1087 aaKnown RBP22.18■■□□□ 1.14
USP48-205ENST00000421625 TBC1D25Q3MII6 688 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 ZNF394Q53GI3 561 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 STRIP1Q5VSL9 837 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 ARHGAP18Q8N392 663 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 GSTCDQ8NEC7 633 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 NCSTNQ92542 709 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 ZBTB45Q96K62 511 aaPredicted RBP22.18■■□□□ 1.14
USP48-205ENST00000421625 TAAR1Q96RJ0 339 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 CNTN6Q9UQ52 1028 aa22.18■■□□□ 1.14
USP48-205ENST00000421625 CALB1P05937 261 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 MTMR2Q13614 643 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 PIGHQ14442 188 aaPredicted RBP22.17■■□□□ 1.14
USP48-205ENST00000421625 DEFB132Q7Z7B7 95 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 FAM160B2Q86V87 743 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 OR5B17Q8NGF7 314 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 PPP2R3CQ969Q6 453 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 CCDC106Q9BWC9 280 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 DEFB129Q9H1M3 183 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 SERPINA10Q9UK55 444 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 ZNF862O60290 1169 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 SPATA31D3P0C874 917 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 CHI3L2Q15782 390 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 SPATA31D4Q6ZUB0 917 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 CPXCR1Q8N123 301 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 ARFGAP1Q8N6T3 406 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 CFAP36Q96G28 342 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 C20orf27Q9GZN8 174 aa22.17■■□□□ 1.14
USP48-205ENST00000421625 ICAM1P05362 532 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 HMGB2P26583 209 aaKnown RBP22.16■■□□□ 1.14
USP48-205ENST00000421625 JAK3P52333 1124 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 CC2D2BQ6DHV5 1058 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 CTAGE3PQ8IX95 158 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 PYDC1Q8WXC3 89 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 E2F7Q96AV8 911 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 C7orf26Q96N11 449 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 SLC13A1Q9BZW2 595 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 XPNPEP1Q9NQW7 623 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 AGO2Q9UKV8 859 aaKnown RBP22.16■■□□□ 1.14
USP48-205ENST00000421625 TELO2Q9Y4R8 837 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 STIP1P31948 543 aaKnown RBP22.16■■□□□ 1.14
USP48-205ENST00000421625 MRPS5P82675 430 aaKnown RBP22.16■■□□□ 1.14
USP48-205ENST00000421625 SLC25A11Q02978 314 aaKnown RBP22.16■■□□□ 1.14
USP48-205ENST00000421625 ENPEPQ07075 957 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 DPYSL3Q14195 570 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 DNAL1Q4LDG9 190 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 BBS12Q6ZW61 710 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 PPM1NQ8N819 430 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 SYTL5Q8TDW5 730 aaPredicted RBP22.16■■□□□ 1.14
USP48-205ENST00000421625 EBF4Q9BQW3 602 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 CENPKQ9BS16 269 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 WWP1Q9H0M0 922 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 PPME1Q9Y570 386 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 WEE2P0C1S8 567 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 PDE1BQ01064 536 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 MARK2Q7KZI7 788 aaKnown RBP22.16■■□□□ 1.14
USP48-205ENST00000421625 RBAKQ9NYW8 714 aaPredicted RBP22.16■■□□□ 1.14
USP48-205ENST00000421625 GABBR1Q9UBS5 961 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 FEM1BQ9UK73 627 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 PLLPQ9Y342 182 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 TEX264Q9Y6I9 313 aa22.16■■□□□ 1.14
USP48-205ENST00000421625 TESPA1A2RU30 521 aaPredicted RBP22.15■■□□□ 1.14
USP48-205ENST00000421625 CXorf49A8MYA2 514 aaPredicted RBP22.15■■□□□ 1.14
USP48-205ENST00000421625 ITGBL1O95965 494 aaPredicted RBP22.15■■□□□ 1.14
USP48-205ENST00000421625 RANBP1P43487 201 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 SEZ6Q53EL9 994 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 TEX44Q53QW1 395 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 TMCO4Q5TGY1 634 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 RNF111Q6ZNA4 994 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 WDTC1Q8N5D0 677 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 RILPQ96NA2 401 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 CAMKK2Q96RR4 588 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 GPAMQ9HCL2 828 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 A0A088AWK7 358 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 TSHRP16473 764 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 PSMA2P25787 234 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 RFC1P35251 1148 aaPredicted RBP22.15■■□□□ 1.14
USP48-205ENST00000421625 GRIA2P42262 883 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 ZNF132P52740 706 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 EIF3EP60228 445 aaKnown RBP22.15■■□□□ 1.14
USP48-205ENST00000421625 BMPR2Q13873 1038 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 SFT2D3Q587I9 215 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms