RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 MYO9BQ13459 2157 aa15.91■□□□□ 0.14
SCAF11-204ENST00000395454 FAM187AA6NFU0 413 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 TRAPPC3O43617 180 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 ZNF252P-AS1Q0IIN9 211 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 PPP2R2DQ66LE6 453 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 FUT10Q6P4F1 479 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 ERICH1Q86X53 443 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 RHOT1Q8IXI2 618 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 SLCO2A1Q92959 643 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 SENP8Q96LD8 212 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 RUNDC3BQ96NL0 473 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 GPR62Q9BZJ7 368 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 ACBD3Q9H3P7 528 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 WDR35Q9P2L0 1181 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 EYSQ5T1H1 3165 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 A0A1W2PPC1 479 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 CYB561D2O14569 222 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 FGF18O76093 207 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 CD19P15391 556 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 SSTR3P32745 418 aaPredicted RBP15.9■□□□□ 0.14
SCAF11-204ENST00000395454 BMPR1AP36894 532 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 DRG2P55039 364 aaKnown RBP15.9■□□□□ 0.14
SCAF11-204ENST00000395454 RPL7AP62424 266 aaKnown RBP15.9■□□□□ 0.14
SCAF11-204ENST00000395454 STILQ15468 1287 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 DNAJC24Q6P3W2 148 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 LCLAT1Q6UWP7 414 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 KLHL23Q8NBE8 558 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 TGS1Q96RS0 853 aaKnown RBP15.9■□□□□ 0.14
SCAF11-204ENST00000395454 CERS4Q9HA82 394 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 MED4Q9NPJ6 270 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 GDAP2Q9NXN4 497 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 NFU1Q9UMS0 254 aa15.9■□□□□ 0.14
SCAF11-204ENST00000395454 ESYT3A0FGR9 886 aa15.89■□□□□ 0.13
SCAF11-204ENST00000395454 HUS1O60921 280 aa15.89■□□□□ 0.13
SCAF11-204ENST00000395454 PTGIRP43119 386 aa15.89■□□□□ 0.13
SCAF11-204ENST00000395454 GPD2P43304 727 aa15.89■□□□□ 0.13
SCAF11-204ENST00000395454 FNTAP49354 379 aa15.89■□□□□ 0.13
SCAF11-204ENST00000395454 NDST1P52848 882 aa15.89■□□□□ 0.13
SCAF11-204ENST00000395454 SMAD3P84022 425 aaKnown RBP15.89■□□□□ 0.13
SCAF11-204ENST00000395454 KRT17Q04695 432 aa15.89■□□□□ 0.13
SCAF11-204ENST00000395454 GPS2Q13227 327 aa15.89■□□□□ 0.13
SCAF11-204ENST00000395454 FAM171A1Q5VUB5 890 aa15.89■□□□□ 0.13
SCAF11-204ENST00000395454 CEP57Q86XR8 500 aa15.89■□□□□ 0.13
SCAF11-204ENST00000395454 APPL2Q8NEU8 664 aa15.89■□□□□ 0.13
SCAF11-204ENST00000395454 TIFAQ96CG3 184 aa15.89■□□□□ 0.13
SCAF11-204ENST00000395454 SUSD3Q96L08 255 aa15.89■□□□□ 0.13
SCAF11-204ENST00000395454 NT5C1AQ9BXI3 368 aa15.89■□□□□ 0.13
SCAF11-204ENST00000395454 LRRC19Q9H756 370 aa15.89■□□□□ 0.13
SCAF11-204ENST00000395454 TIMM13Q9Y5L4 95 aaPredicted RBP15.89■□□□□ 0.13
SCAF11-204ENST00000395454 SIGLEC16A6NMB1 481 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 H3BQF6 201 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 TTI1O43156 1089 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 MICAL2O94851 1124 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 ODC1P11926 461 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 TAS2R40P59535 323 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 DR1Q01658 176 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 GABPB1Q06547 395 aaPredicted RBP15.88■□□□□ 0.13
SCAF11-204ENST00000395454 ELAVL2Q12926 359 aaKnown RBP15.88■□□□□ 0.13
SCAF11-204ENST00000395454 KLF1Q13351 362 aaPredicted RBP15.88■□□□□ 0.13
SCAF11-204ENST00000395454 PIGHQ14442 188 aaPredicted RBP15.88■□□□□ 0.13
SCAF11-204ENST00000395454 SGO2Q562F6 1265 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 DUPD1Q68J44 220 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 SND1Q7KZF4 910 aaKnown RBP eCLIP15.88■□□□□ 0.13
SCAF11-204ENST00000395454 UNC93AQ86WB7 457 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 EXD1Q8NHP7 514 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 MAIP1Q8WWC4 291 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 B3GALT6Q96L58 329 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 CPXM1Q96SM3 734 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 RAB17Q9H0T7 212 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 M0QZQ0 153 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 RARAP10276 462 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 PAX3P23760 479 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 PTPN7P35236 360 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 TNNT3P45378 269 aaPredicted RBP15.88■□□□□ 0.13
SCAF11-204ENST00000395454 OGDHQ02218 1023 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 ZNF268Q14587 947 aaPredicted RBP15.88■□□□□ 0.13
SCAF11-204ENST00000395454 TRADDQ15628 312 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 SOWAHAQ2M3V2 549 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 LRIT3Q3SXY7 679 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 PKDCCQ504Y2 493 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 PHLDB2Q86SQ0 1253 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 XYLT1Q86Y38 959 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 TOP6BLQ8N6T0 577 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 MCRS1Q96EZ8 462 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 HINFPQ9BQA5 517 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 ALG13Q9NP73 1137 aaKnown RBP15.88■□□□□ 0.13
SCAF11-204ENST00000395454 FAM114A2Q9NRY5 505 aa15.88■□□□□ 0.13
SCAF11-204ENST00000395454 VWA8A3KMH1 1905 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 TCRBV7S2A1N4TA0A589 114 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 CSPG5O95196 566 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 TKTP29401 623 aaKnown RBP15.87■□□□□ 0.13
SCAF11-204ENST00000395454 OAS2P29728 719 aaKnown RBP15.87■□□□□ 0.13
SCAF11-204ENST00000395454 ERVK-21P61565 698 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 PLCB3Q01970 1234 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 PDCLQ13371 301 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 WSCD1Q658N2 575 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 TTC27Q6P3X3 843 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 TAS1R1Q7RTX1 841 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 POLNQ7Z5Q5 900 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 ADGRF2Q8IZF7 708 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms