RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 UROC1Q96N76 676 aa6.52□□□□□ -1.37
LINC00458-206ENST00000607494 KLHL32Q96NJ5 620 aa6.52□□□□□ -1.37
LINC00458-206ENST00000607494 SARS2Q9NP81 518 aaKnown RBP6.52□□□□□ -1.37
LINC00458-206ENST00000607494 CNNM1Q9NRU3 951 aa6.52□□□□□ -1.37
LINC00458-206ENST00000607494 INTS13Q9NVM9 706 aa6.52□□□□□ -1.37
LINC00458-206ENST00000607494 MAP3K20Q9NYL2 800 aaKnown RBP6.52□□□□□ -1.37
LINC00458-206ENST00000607494 SWAP70Q9UH65 585 aa6.52□□□□□ -1.37
LINC00458-206ENST00000607494 FEZ2Q9UHY8 353 aaPredicted RBP6.52□□□□□ -1.37
LINC00458-206ENST00000607494 CPA4Q9UI42 421 aa6.52□□□□□ -1.37
LINC00458-206ENST00000607494 MAGED2Q9UNF1 606 aaPredicted RBP6.52□□□□□ -1.37
LINC00458-206ENST00000607494 PRAMEF33A0A0G2JMD5 474 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 WIPF3A6NGB9 483 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 PRRT4C9JH25 899 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 F8W8V4 182 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 PRAMEF10O60809 474 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 CSTBP04080 98 aaKnown RBP6.51□□□□□ -1.37
LINC00458-206ENST00000607494 FTH1P19P0C7X4 201 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 EN2P19622 333 aaPredicted RBP6.51□□□□□ -1.37
LINC00458-206ENST00000607494 SMARCA1P28370 1054 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 HSPA7P48741 367 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 SUMO3P55854 103 aaPredicted RBP6.51□□□□□ -1.37
LINC00458-206ENST00000607494 RPS7P62081 194 aaKnown RBP6.51□□□□□ -1.37
LINC00458-206ENST00000607494 MC2RQ01718 297 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 SRSF4Q08170 494 aaKnown RBP6.51□□□□□ -1.37
LINC00458-206ENST00000607494 FOXD4Q12950 439 aaPredicted RBP6.51□□□□□ -1.37
LINC00458-206ENST00000607494 PPFIA1Q13136 1202 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 TSTD2Q5T7W7 516 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 VWA1Q6PCB0 445 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 AMIGO2Q86SJ2 522 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 IL17RDQ8NFM7 739 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 MRGPRX1Q96LB2 322 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 WDCPQ9H6R7 721 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 PIH1D1Q9NWS0 290 aaKnown RBP6.51□□□□□ -1.37
LINC00458-206ENST00000607494 CTTNBP2NLQ9P2B4 639 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 CPNE7Q9UBL6 633 aa6.51□□□□□ -1.37
LINC00458-206ENST00000607494 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.51□□□□□ -1.37
LINC00458-206ENST00000607494 A0A1W2PPC4 97 aa6.5□□□□□ -1.37
LINC00458-206ENST00000607494 A0A1W2PS29 197 aa6.5□□□□□ -1.37
LINC00458-206ENST00000607494 MANSC4A6NHS7 340 aaPredicted RBP6.5□□□□□ -1.37
LINC00458-206ENST00000607494 TOR1BO14657 336 aa6.5□□□□□ -1.37
LINC00458-206ENST00000607494 FFAR2O15552 330 aa6.5□□□□□ -1.37
LINC00458-206ENST00000607494 CHRM2P08172 466 aa6.5□□□□□ -1.37
LINC00458-206ENST00000607494 HARSP12081 509 aaKnown RBP6.5□□□□□ -1.37
LINC00458-206ENST00000607494 MPEG1Q2M385 716 aa6.5□□□□□ -1.37
LINC00458-206ENST00000607494 SLC4A8Q2Y0W8 1093 aa6.5□□□□□ -1.37
LINC00458-206ENST00000607494 ARL13BQ3SXY8 428 aa6.5□□□□□ -1.37
LINC00458-206ENST00000607494 CLASRPQ8N2M8 674 aaKnown RBP6.5□□□□□ -1.37
LINC00458-206ENST00000607494 TMIEQ8NEW7 156 aa6.5□□□□□ -1.37
LINC00458-206ENST00000607494 BRIX1Q8TDN6 353 aaKnown RBP6.5□□□□□ -1.37
LINC00458-206ENST00000607494 ZHX3Q9H4I2 956 aa6.5□□□□□ -1.37
LINC00458-206ENST00000607494 JKAMPQ9P055 326 aa6.5□□□□□ -1.37
LINC00458-206ENST00000607494 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.5□□□□□ -1.37
LINC00458-206ENST00000607494 PCDHA6Q9UN73 950 aa6.5□□□□□ -1.37
LINC00458-206ENST00000607494 CEP83Q9Y592 693 aa6.5□□□□□ -1.37
LINC00458-206ENST00000607494 PCDHA1Q9Y5I3 950 aa6.5□□□□□ -1.37
LINC00458-206ENST00000607494 TTBK1Q5TCY1 1321 aaPredicted RBP6.5□□□□□ -1.37
LINC00458-206ENST00000607494 ADM5C9JUS6 153 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 M0R3H8 397 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 ORC4O43929 436 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 PROP1O75360 226 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 SLC43A1O75387 559 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 MAN1A1P33908 653 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 MAPK9P45984 424 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 DYRK1AQ13627 763 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 SIM2Q14190 667 aaPredicted RBP6.49□□□□□ -1.37
LINC00458-206ENST00000607494 KHDC1LQ5JSQ8 128 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 KLHDC7AQ5VTJ3 777 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 JAKMIP3Q5VZ66 844 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 CFAP52Q8N1V2 620 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 ATP11CQ8NB49 1132 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 PDPRQ8NCN5 879 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 MYCBPAPQ8TBZ2 947 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 DPF1Q92782 380 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 TBC1D20Q96BZ9 403 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 MPP4Q96JB8 637 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 ZNF778Q96MU6 729 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 BRIP1Q9BX63 1249 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 SLC29A3Q9BZD2 475 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 AFF4Q9UHB7 1163 aaKnown RBP6.49□□□□□ -1.37
LINC00458-206ENST00000607494 ENTPD2Q9Y5L3 495 aa6.49□□□□□ -1.37
LINC00458-206ENST00000607494 LINC00473A8K010 186 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 NT5C1B-RDH14C9J2C7 533 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 PLA2G6O60733 806 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 SKAP2O75563 359 aaPredicted RBP6.48□□□□□ -1.37
LINC00458-206ENST00000607494 SUN1O94901 812 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 PRDX5P30044 214 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 PDIA3P30101 505 aaKnown RBP6.48□□□□□ -1.37
LINC00458-206ENST00000607494 DDIT3P35638 169 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 ALDH9A1P49189 494 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 TXNRD1Q16881 649 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 SLC35G1Q2M3R5 365 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 ZNF365Q70YC5 407 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 PPP1R3BQ86XI6 285 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 ANKRD18AQ8IVF6 992 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 ADGRG5Q8IZF4 528 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 AOPEPQ8N6M6 819 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 CELF5Q8N6W0 485 aaKnown RBP6.48□□□□□ -1.37
LINC00458-206ENST00000607494 IL17REQ8NFR9 667 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 TRAPPC12Q8WVT3 735 aa6.48□□□□□ -1.37
LINC00458-206ENST00000607494 KBTBD7Q8WVZ9 684 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms