RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 YWHAQP27348 245 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 ERCC5P28715 1186 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-227ENST00000591849 PPP3CCP48454 512 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 PDE6CP51160 858 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 MAP3K7CLP57077 242 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 INCA1Q0VD86 236 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 DPCR1Q3MIW9 517 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 CT47A1Q5JQC4 288 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-227ENST00000591849 CC2D1AQ6P1N0 951 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-227ENST00000591849 MON1AQ86VX9 555 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 MFSD6LQ8IWD5 586 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 TRIM59Q8IWR1 403 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 CMTM8Q8IZV2 173 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 CELF5Q8N6W0 485 aaKnown RBP10.68□□□□□ -0.7
BRCA1-227ENST00000591849 C12orf29Q8N999 325 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 EHBP1Q8NDI1 1231 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 CSGALNACT1Q8TDX6 532 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 IRF7Q92985 503 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 FBXO32Q969P5 355 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 TMEM176AQ96HP8 235 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 CNOT6LQ96LI5 555 aaKnown RBP10.68□□□□□ -0.7
BRCA1-227ENST00000591849 MYRFLQ96LU7 910 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 KCNK16Q96T55 309 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 SLC46A2Q9BY10 475 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 TRPV4Q9HBA0 871 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 IL21Q9HBE4 155 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 ARHGEF3Q9NR81 526 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 HMGXB4Q9UGU5 601 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 MYO10Q9HD67 2058 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 C2orf16Q68DN1 1984 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 SOBPA7XYQ1 873 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 PDGFBP01127 241 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-227ENST00000591849 CKMP06732 381 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 TPM2P07951 284 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 PRKCSHP14314 528 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-227ENST00000591849 HDCP19113 662 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 KPNA1P52294 538 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-227ENST00000591849 MARSP56192 900 aaKnown RBP10.67□□□□□ -0.7
BRCA1-227ENST00000591849 NHLH1Q02575 133 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 TAF10Q12962 218 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 CCDC183Q5T5S1 534 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 ASTLQ6HA08 431 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-227ENST00000591849 POTEHQ6S545 545 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 VITQ6UXI7 678 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 GBP6Q6ZN66 633 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 ALYREFQ86V81 257 aaKnown RBP10.67□□□□□ -0.7
BRCA1-227ENST00000591849 FUKQ8N0W3 1084 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 PDZD8Q8NEN9 1154 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 BPIFB1Q8TDL5 484 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 TWNKQ96RR1 684 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 HNRNPABQ99729 332 aaKnown RBP10.67□□□□□ -0.7
BRCA1-227ENST00000591849 ARID3AQ99856 593 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 NACA2Q9H009 215 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 INTS2Q9H0H0 1204 aaKnown RBP10.67□□□□□ -0.7
BRCA1-227ENST00000591849 SMG9Q9H0W8 520 aaKnown RBP10.67□□□□□ -0.7
BRCA1-227ENST00000591849 FBXO44Q9H4M3 255 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 THAP9Q9H5L6 903 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 FAM124BQ9H5Z6 455 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-227ENST00000591849 TDP1Q9NUW8 608 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 ANO10Q9NW15 660 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 OBP2AQ9NY56 170 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 HESX1Q9UBX0 185 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 DENND4AQ7Z401 1863 aa10.67□□□□□ -0.7
BRCA1-227ENST00000591849 PMM2O15305 246 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 CHADO15335 359 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 FCARP24071 287 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 AVPR2P30518 371 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 MRE11P49959 708 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 CLCN5P51795 746 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 SLC5A3P53794 718 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 CACNA2D1P54289 1103 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 USP46P62068 366 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 PLCB2Q00722 1185 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 PRKCQQ04759 706 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 UBXN2BQ14CS0 331 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 MLF2Q15773 248 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-227ENST00000591849 ARHGAP29Q52LW3 1261 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 SGO2Q562F6 1265 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 HSP90AA4PQ58FG1 418 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 TMEM270Q6UE05 265 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 PAQR9Q6ZVX9 377 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 RRAGAQ7L523 313 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 TMEM150AQ86TG1 271 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 ARL14EPQ8N8R7 260 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-227ENST00000591849 WHAMMQ8TF30 809 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 CYP2S1Q96SQ9 504 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 SMOQ99835 787 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 CRACR2AQ9BSW2 395 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 TTLL2Q9BWV7 592 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 IRF2BPLQ9H1B7 796 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 TBC1D17Q9HA65 648 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 KIF9Q9HAQ2 790 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 COMMD8Q9NX08 183 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 CHORDC1Q9UHD1 332 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-227ENST00000591849 KIAA1257Q9ULG3 409 aa10.66□□□□□ -0.7
BRCA1-227ENST00000591849 MRPS17Q9Y2R5 130 aaKnown RBP10.66□□□□□ -0.7
BRCA1-227ENST00000591849 KRBA1A5PL33 1030 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 MAN2B1O00754 1011 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 MBL2P11226 248 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-227ENST00000591849 VDRP11473 427 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms