RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	CARNS1	A5YM72	827 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	GOLGA6B	A6NDN3	693 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	GOLGA6L10	A6NI86	522 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	SMAP	O00193	183 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	PITPNM1	O00562	1244 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	TTI1	O43156	1089 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	PRPSAP2	O60256	369 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	KRT1	P04264	644 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	CYP11A1	P05108	521 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	RARA	P10276	462 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	SELP	P16109	830 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	PDGFRA	P16234	1089 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	MLH1	P40692	756 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	PTPN9	P43378	593 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	RGS19	P49795	217 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	FAM189B	P81408	668 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	SLMAP	Q14BN4	828 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	ZNF618	Q5T7W0	954 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	CYP4A22	Q5TCH4	519 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	DUPD1	Q68J44	220 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	AGMO	Q6ZNB7	445 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	ZNF365	Q70YC5	407 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	SLC26A9	Q7LBE3	791 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	ECHDC2	Q86YB7	292 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	JAML	Q86YT9	394 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	PSTK	Q8IV42	348 aa	Known RBP	10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	CMAS	Q8NFW8	434 aa	Predicted RBP	10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	UBA3	Q8TBC4	463 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	DIS3L	Q8TF46	1054 aa	Known RBP	10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	HDAC7	Q8WUI4	952 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	KBTBD7	Q8WVZ9	684 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	ACBD6	Q9BR61	282 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	MAK16	Q9BXY0	300 aa	Known RBP	10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	OXCT2	Q9BYC2	517 aa	Predicted RBP	10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	AGO3	Q9H9G7	860 aa	Known RBP	10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	METTL5	Q9NRN9	209 aa	Known RBP	10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	WHRN	Q9P202	907 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	HMGXB4	Q9UGU5	601 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	NFU1	Q9UMS0	254 aa		10.42	□□□□□ -0.74
TRIM16-222	ENST00000581224	MKI67	P46013	3256 aa	Known RBP	10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	C2CD4B	A6NLJ0	364 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	GOLGA8K	D6RF30	607 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224		E5RJQ4	531 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224		F8VP50	259 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	TNRC18	O15417	2968 aa	Predicted RBP	10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	ZMYND10	O75800	440 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	PDGFRB	P09619	1106 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	FAM200B	P0CF97	657 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	RALA	P11233	206 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	ZFX	P17010	805 aa	Predicted RBP	10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	TYMP	P19971	482 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	SSTR3	P32745	418 aa	Predicted RBP	10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	MARCKSL1	P49006	195 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	CARS	P49589	748 aa	Known RBP	10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	AIF1	P55008	147 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	EIF3B	P55884	814 aa	Known RBP	10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	GABPB1	Q06547	395 aa	Predicted RBP	10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	SOX4	Q06945	474 aa	Predicted RBP	10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	PDE4C	Q08493	712 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	KLF1	Q13351	362 aa	Predicted RBP	10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	UPP1	Q16831	310 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	C2CD6	Q53TS8	623 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	SCARA3	Q6AZY7	606 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	LRIG3	Q6UXM1	1119 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	C4orf22	Q6V702	233 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	SPOCD1	Q6ZMY3	1216 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	BZW1	Q7L1Q6	419 aa	Known RBP	10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	PHLDB2	Q86SQ0	1253 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	C12orf29	Q8N999	325 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	KCTD6	Q8NC69	237 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	PPP1R13L	Q8WUF5	828 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	CASKIN2	Q8WXE0	1202 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	SEPT8	Q92599	483 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	ZFP42	Q96MM3	310 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	FAM193B	Q96PV7	902 aa	Predicted RBP	10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	SLITRK1	Q96PX8	696 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	FMO2	Q99518	471 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	MED10	Q9BTT4	135 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	DCLK3	Q9C098	648 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	CRISPLD2	Q9H0B8	497 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	LRRC4	Q9HBW1	653 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	TRMT13	Q9NUP7	481 aa	Known RBP	10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	DDX43	Q9NXZ2	648 aa	Known RBP	10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	CYTH4	Q9UIA0	394 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	STAP1	Q9ULZ2	295 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	USP18	Q9UMW8	372 aa		10.41	□□□□□ -0.74
TRIM16-222	ENST00000581224	LRRD1	A4D1F6	860 aa		10.4	□□□□□ -0.74
TRIM16-222	ENST00000581224	TMEM189-UBE2V1	I3L0A0	370 aa		10.4	□□□□□ -0.74
TRIM16-222	ENST00000581224		M0QZQ0	153 aa		10.4	□□□□□ -0.74
TRIM16-222	ENST00000581224	PPEF2	O14830	753 aa		10.4	□□□□□ -0.74
TRIM16-222	ENST00000581224	SPTLC1	O15269	473 aa		10.4	□□□□□ -0.74
TRIM16-222	ENST00000581224	DAPK3	O43293	454 aa		10.4	□□□□□ -0.74
TRIM16-222	ENST00000581224	LRCH4	O75427	683 aa		10.4	□□□□□ -0.74
TRIM16-222	ENST00000581224	TRUB2	O95900	331 aa	Known RBP	10.4	□□□□□ -0.74
TRIM16-222	ENST00000581224	NPR3	P17342	541 aa		10.4	□□□□□ -0.74
TRIM16-222	ENST00000581224	HSPA9	P38646	679 aa	Known RBP	10.4	□□□□□ -0.74
TRIM16-222	ENST00000581224	PTGIR	P43119	386 aa		10.4	□□□□□ -0.74
TRIM16-222	ENST00000581224	CDK7	P50613	346 aa		10.4	□□□□□ -0.74
TRIM16-222	ENST00000581224	SCNN1G	P51170	649 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms