RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 MON1AQ86VX9 555 aa21.93■■□□□ 1.1
CHMP6-204ENST00000572778 NUP93Q8N1F7 819 aa21.93■■□□□ 1.1
CHMP6-204ENST00000572778 HEXIM2Q96MH2 286 aaKnown RBP21.93■■□□□ 1.1
CHMP6-204ENST00000572778 NT5C1BQ96P26 610 aa21.93■■□□□ 1.1
CHMP6-204ENST00000572778 TRPM5Q9NZQ8 1165 aa21.93■■□□□ 1.1
CHMP6-204ENST00000572778 HCN4Q9Y3Q4 1203 aa21.93■■□□□ 1.1
CHMP6-204ENST00000572778 ZNF263O14978 683 aa21.92■■□□□ 1.1
CHMP6-204ENST00000572778 PRAMEF12O95522 483 aa21.92■■□□□ 1.1
CHMP6-204ENST00000572778 MBD3O95983 291 aa21.92■■□□□ 1.1
CHMP6-204ENST00000572778 FAM200BP0CF97 657 aa21.92■■□□□ 1.1
CHMP6-204ENST00000572778 WEE1P30291 646 aa21.92■■□□□ 1.1
CHMP6-204ENST00000572778 MAP3K7CLP57077 242 aa21.92■■□□□ 1.1
CHMP6-204ENST00000572778 SLC44A4Q53GD3 710 aa21.92■■□□□ 1.1
CHMP6-204ENST00000572778 IER5LQ5T953 404 aa21.92■■□□□ 1.1
CHMP6-204ENST00000572778 TMEM176AQ96HP8 235 aa21.92■■□□□ 1.1
CHMP6-204ENST00000572778 HNRNPABQ99729 332 aaKnown RBP21.92■■□□□ 1.1
CHMP6-204ENST00000572778 SMOQ99835 787 aa21.92■■□□□ 1.1
CHMP6-204ENST00000572778 TTLL2Q9BWV7 592 aa21.92■■□□□ 1.1
CHMP6-204ENST00000572778 SOBPA7XYQ1 873 aa21.91■■□□□ 1.1
CHMP6-204ENST00000572778 RTN3O95197 1032 aaPredicted RBP21.91■■□□□ 1.1
CHMP6-204ENST00000572778 NPR3P17342 541 aa21.91■■□□□ 1.1
CHMP6-204ENST00000572778 YWHAQP27348 245 aa21.91■■□□□ 1.1
CHMP6-204ENST00000572778 ERCC5P28715 1186 aaPredicted RBP21.91■■□□□ 1.1
CHMP6-204ENST00000572778 AVPR2P30518 371 aa21.91■■□□□ 1.1
CHMP6-204ENST00000572778 RAD23BP54727 409 aa21.91■■□□□ 1.1
CHMP6-204ENST00000572778 VCPP55072 806 aaKnown RBP21.91■■□□□ 1.1
CHMP6-204ENST00000572778 YWHAEP62258 255 aaKnown RBP21.91■■□□□ 1.1
CHMP6-204ENST00000572778 TAF10Q12962 218 aa21.91■■□□□ 1.1
CHMP6-204ENST00000572778 CELF5Q8N6W0 485 aaKnown RBP21.91■■□□□ 1.1
CHMP6-204ENST00000572778 EHBP1Q8NDI1 1231 aa21.91■■□□□ 1.1
CHMP6-204ENST00000572778 IRF7Q92985 503 aa21.91■■□□□ 1.1
CHMP6-204ENST00000572778 LRRC3BQ96PB8 259 aa21.91■■□□□ 1.1
CHMP6-204ENST00000572778 SLITRK1Q96PX8 696 aa21.91■■□□□ 1.1
CHMP6-204ENST00000572778 TRIOO75962 3097 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 TRAV19A0A0A6YYK7 116 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 BEST1O76090 585 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 ABL1P00519 1130 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 TBXAS1P24557 533 aaPredicted RBP21.9■■□□□ 1.1
CHMP6-204ENST00000572778 MTIF2P46199 727 aaKnown RBP21.9■■□□□ 1.1
CHMP6-204ENST00000572778 SLC5A3P53794 718 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 MLF2Q15773 248 aaPredicted RBP21.9■■□□□ 1.1
CHMP6-204ENST00000572778 ASTLQ6HA08 431 aaPredicted RBP21.9■■□□□ 1.1
CHMP6-204ENST00000572778 IRF2BP1Q8IU81 584 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 PPM1KQ8N3J5 372 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 SLC4A11Q8NBS3 891 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 ZMIZ2Q8NF64 920 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 LMO3Q8TAP4 145 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 BPIFB1Q8TDL5 484 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 FBXO32Q969P5 355 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 JAKMIP2Q96AA8 810 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 SHDQ96IW2 340 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 CYP2S1Q96SQ9 504 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 FAM124BQ9H5Z6 455 aaPredicted RBP21.9■■□□□ 1.1
CHMP6-204ENST00000572778 TBC1D17Q9HA65 648 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 OBP2AQ9NY56 170 aa21.9■■□□□ 1.1
CHMP6-204ENST00000572778 C2orf78A6NCI8 922 aa21.89■■□□□ 1.09
CHMP6-204ENST00000572778 CKMP06732 381 aa21.89■■□□□ 1.09
CHMP6-204ENST00000572778 USP17L7P0C7H9 530 aa21.89■■□□□ 1.09
CHMP6-204ENST00000572778 CLCN5P51795 746 aa21.89■■□□□ 1.09
CHMP6-204ENST00000572778 PPP1R26Q5T8A7 1209 aaPredicted RBP21.89■■□□□ 1.09
CHMP6-204ENST00000572778 CWF19L1Q69YN2 538 aaKnown RBP21.89■■□□□ 1.09
CHMP6-204ENST00000572778 SASS6Q6UVJ0 657 aa21.89■■□□□ 1.09
CHMP6-204ENST00000572778 ARL14EPQ8N8R7 260 aaPredicted RBP21.89■■□□□ 1.09
CHMP6-204ENST00000572778 TTC16Q8NEE8 873 aa21.89■■□□□ 1.09
CHMP6-204ENST00000572778 SCAMP5Q8TAC9 235 aa21.89■■□□□ 1.09
CHMP6-204ENST00000572778 DNASE1L2Q92874 299 aa21.89■■□□□ 1.09
CHMP6-204ENST00000572778 USP13Q92995 863 aaPredicted RBP21.89■■□□□ 1.09
CHMP6-204ENST00000572778 THAP9Q9H5L6 903 aa21.89■■□□□ 1.09
CHMP6-204ENST00000572778 CSNK1G1Q9HCP0 422 aa21.89■■□□□ 1.09
CHMP6-204ENST00000572778 HEBP1Q9NRV9 189 aa21.89■■□□□ 1.09
CHMP6-204ENST00000572778 TDP1Q9NUW8 608 aa21.89■■□□□ 1.09
CHMP6-204ENST00000572778 CCL26Q9Y258 94 aa21.89■■□□□ 1.09
CHMP6-204ENST00000572778 ZNF840PA6NDX5 716 aa21.88■■□□□ 1.09
CHMP6-204ENST00000572778 TNFRSF10BO14763 440 aa21.88■■□□□ 1.09
CHMP6-204ENST00000572778 CHADO15335 359 aa21.88■■□□□ 1.09
CHMP6-204ENST00000572778 PPP3CCP48454 512 aa21.88■■□□□ 1.09
CHMP6-204ENST00000572778 PRKCQQ04759 706 aa21.88■■□□□ 1.09
CHMP6-204ENST00000572778 FCHO2Q0JRZ9 810 aa21.88■■□□□ 1.09
CHMP6-204ENST00000572778 HSP90AA4PQ58FG1 418 aa21.88■■□□□ 1.09
CHMP6-204ENST00000572778 CT47A1Q5JQC4 288 aaPredicted RBP21.88■■□□□ 1.09
CHMP6-204ENST00000572778 RBM43Q6ZSC3 357 aaKnown RBP21.88■■□□□ 1.09
CHMP6-204ENST00000572778 CLEC20AQ6ZU45 233 aa21.88■■□□□ 1.09
CHMP6-204ENST00000572778 RRAGAQ7L523 313 aa21.88■■□□□ 1.09
CHMP6-204ENST00000572778 FAM114A1Q8IWE2 563 aa21.88■■□□□ 1.09
CHMP6-204ENST00000572778 TMEM105Q8N8V8 129 aa21.88■■□□□ 1.09
CHMP6-204ENST00000572778 SLC22A12Q96S37 553 aa21.88■■□□□ 1.09
CHMP6-204ENST00000572778 INTS2Q9H0H0 1204 aaKnown RBP21.88■■□□□ 1.09
CHMP6-204ENST00000572778 KIF9Q9HAQ2 790 aa21.88■■□□□ 1.09
CHMP6-204ENST00000572778 THG1LQ9NWX6 298 aaKnown RBP21.88■■□□□ 1.09
CHMP6-204ENST00000572778 PCDHB4Q9Y5E5 795 aa21.88■■□□□ 1.09
CHMP6-204ENST00000572778 PI15O43692 258 aa21.87■■□□□ 1.09
CHMP6-204ENST00000572778 HDCP19113 662 aa21.87■■□□□ 1.09
CHMP6-204ENST00000572778 AOC1P19801 751 aa21.87■■□□□ 1.09
CHMP6-204ENST00000572778 STARD6P59095 220 aa21.87■■□□□ 1.09
CHMP6-204ENST00000572778 ARHGAP29Q52LW3 1261 aa21.87■■□□□ 1.09
CHMP6-204ENST00000572778 CCDC183Q5T5S1 534 aa21.87■■□□□ 1.09
CHMP6-204ENST00000572778 PHLDB3Q6NSJ2 640 aa21.87■■□□□ 1.09
CHMP6-204ENST00000572778 TPRG1Q6ZUI0 275 aa21.87■■□□□ 1.09
CHMP6-204ENST00000572778 ARHGEF19Q8IW93 802 aa21.87■■□□□ 1.09
CHMP6-204ENST00000572778 PDZD8Q8NEN9 1154 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms