RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 ARHGAP15Q53QZ3 475 aa13.79□□□□□ -0.2
CNOT1-213ENST00000568158 CDKAL1Q5VV42 579 aa13.79□□□□□ -0.2
CNOT1-213ENST00000568158 TXNDC8Q6A555 127 aa13.79□□□□□ -0.2
CNOT1-213ENST00000568158 TMEM270Q6UE05 265 aa13.79□□□□□ -0.2
CNOT1-213ENST00000568158 NUP93Q8N1F7 819 aa13.79□□□□□ -0.2
CNOT1-213ENST00000568158 MAB21L3Q8N8X9 362 aa13.79□□□□□ -0.2
CNOT1-213ENST00000568158 SCAMP5Q8TAC9 235 aa13.79□□□□□ -0.2
CNOT1-213ENST00000568158 ZSCAN18Q8TBC5 510 aaPredicted RBP13.79□□□□□ -0.2
CNOT1-213ENST00000568158 TRMT2BQ96GJ1 504 aaKnown RBP13.79□□□□□ -0.2
CNOT1-213ENST00000568158 SMARCD1Q96GM5 515 aa13.79□□□□□ -0.2
CNOT1-213ENST00000568158 CYP2S1Q96SQ9 504 aa13.79□□□□□ -0.2
CNOT1-213ENST00000568158 FUCA2Q9BTY2 467 aa13.79□□□□□ -0.2
CNOT1-213ENST00000568158 GPR88Q9GZN0 384 aa13.79□□□□□ -0.2
CNOT1-213ENST00000568158 VPS16Q9H269 839 aa13.79□□□□□ -0.2
CNOT1-213ENST00000568158 TASP1Q9H6P5 420 aa13.79□□□□□ -0.2
CNOT1-213ENST00000568158 CHORDC1Q9UHD1 332 aaPredicted RBP13.79□□□□□ -0.2
CNOT1-213ENST00000568158 ZNF638Q14966 1978 aaKnown RBP13.79□□□□□ -0.2
CNOT1-213ENST00000568158 ATP8B3O60423 1300 aa13.79□□□□□ -0.2
CNOT1-213ENST00000568158 BDP1A6H8Y1 2624 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 SYCE3A1L190 88 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 TNFRSF10BO14763 440 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 TADA3O75528 432 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 LETM1O95202 739 aaPredicted RBP13.78□□□□□ -0.2
CNOT1-213ENST00000568158 FAM200BP0CF97 657 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 CD19P15391 556 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 TRIM21P19474 475 aaKnown RBP13.78□□□□□ -0.2
CNOT1-213ENST00000568158 FCARP24071 287 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 EEF1GP26641 437 aaKnown RBP13.78□□□□□ -0.2
CNOT1-213ENST00000568158 YWHAEP62258 255 aaKnown RBP13.78□□□□□ -0.2
CNOT1-213ENST00000568158 GPC5P78333 572 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 MYL5Q02045 173 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 TAF10Q12962 218 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 EXOC3L4Q17RC7 722 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 TRIM65Q6PJ69 517 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 TRIM67Q6ZTA4 783 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 CLEC20AQ6ZU45 233 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 MTSS1LQ765P7 747 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 ARID3BQ8IVW6 561 aaPredicted RBP13.78□□□□□ -0.2
CNOT1-213ENST00000568158 AOPEPQ8N6M6 819 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 SMARCD2Q92925 531 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 JAKMIP2Q96AA8 810 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 RSPRY1Q96DX4 576 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 CEP295NLQ96MC4 621 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 GCNAQ96QF7 691 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 DNAI2Q9GZS0 605 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 ZFP14Q9HCL3 533 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 CSNK1G1Q9HCP0 422 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 DMAP1Q9NPF5 467 aaPredicted RBP13.78□□□□□ -0.2
CNOT1-213ENST00000568158 C11orf16Q9NQ32 467 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 KRT82Q9NSB4 513 aa13.78□□□□□ -0.2
CNOT1-213ENST00000568158 UXTQ9UBK9 157 aaPredicted RBP13.78□□□□□ -0.2
CNOT1-213ENST00000568158 GTPBP10A4D1E9 387 aaKnown RBP13.77□□□□□ -0.21
CNOT1-213ENST00000568158 HHLA1C9JL84 531 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 NCANO14594 1321 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 ECI2O75521 394 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 ABL1P00519 1130 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 VDRP11473 427 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 CDK11BP21127 795 aaKnown RBP13.77□□□□□ -0.21
CNOT1-213ENST00000568158 YWHAQP27348 245 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 GCNT1Q02742 428 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 GRM2Q14416 872 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 KRT31Q15323 416 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 ARHGAP44Q17R89 818 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 ARHGAP17Q68EM7 881 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 DPY19L2P1Q6NXN4 242 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 UBALD2Q8IYN6 164 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 TFAP2BQ92481 460 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 MRPS31Q92665 395 aaKnown RBP13.77□□□□□ -0.21
CNOT1-213ENST00000568158 ELSPBP1Q96BH3 223 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 LRRC3BQ96PB8 259 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 ZSWIM1Q9BR11 485 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 TTLL2Q9BWV7 592 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 DUSP16Q9BY84 665 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 SMG9Q9H0W8 520 aaKnown RBP13.77□□□□□ -0.21
CNOT1-213ENST00000568158 ANAPC1Q9H1A4 1944 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 HSD3B7Q9H2F3 369 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 FAM124BQ9H5Z6 455 aaPredicted RBP13.77□□□□□ -0.21
CNOT1-213ENST00000568158 SIX2Q9NPC8 291 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 IL37Q9NZH6 218 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 AJAP1Q9UKB5 411 aaPredicted RBP13.77□□□□□ -0.21
CNOT1-213ENST00000568158 DUSP12Q9UNI6 340 aa13.77□□□□□ -0.21
CNOT1-213ENST00000568158 C2orf78A6NCI8 922 aa13.76□□□□□ -0.21
CNOT1-213ENST00000568158 TMEM221A6NGB7 291 aa13.76□□□□□ -0.21
CNOT1-213ENST00000568158 HEPACAM2A8MVW5 462 aa13.76□□□□□ -0.21
CNOT1-213ENST00000568158 M0R296 226 aa13.76□□□□□ -0.21
CNOT1-213ENST00000568158 RTN3O95197 1032 aaPredicted RBP13.76□□□□□ -0.21
CNOT1-213ENST00000568158 CFHP08603 1231 aa13.76□□□□□ -0.21
CNOT1-213ENST00000568158 COPB1P53618 953 aaKnown RBP13.76□□□□□ -0.21
CNOT1-213ENST00000568158 SLC5A3P53794 718 aa13.76□□□□□ -0.21
CNOT1-213ENST00000568158 MFAP3P55082 362 aa13.76□□□□□ -0.21
CNOT1-213ENST00000568158 SIGLEC14Q08ET2 396 aa13.76□□□□□ -0.21
CNOT1-213ENST00000568158 SKOR2Q2VWA4 1001 aaPredicted RBP13.76□□□□□ -0.21
CNOT1-213ENST00000568158 SGO2Q562F6 1265 aa13.76□□□□□ -0.21
CNOT1-213ENST00000568158 IER5LQ5T953 404 aa13.76□□□□□ -0.21
CNOT1-213ENST00000568158 VITQ6UXI7 678 aa13.76□□□□□ -0.21
CNOT1-213ENST00000568158 GPRIN1Q7Z2K8 1008 aa13.76□□□□□ -0.21
CNOT1-213ENST00000568158 MON1AQ86VX9 555 aa13.76□□□□□ -0.21
CNOT1-213ENST00000568158 TTC30AQ86WT1 665 aa13.76□□□□□ -0.21
CNOT1-213ENST00000568158 CMTM8Q8IZV2 173 aa13.76□□□□□ -0.21
CNOT1-213ENST00000568158 ARL14EPQ8N8R7 260 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms