RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 RGS7P49802 495 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 MRPS5P82675 430 aaKnown RBP13.15□□□□□ -0.3
GABPB1-208ENST00000558970 TFF2Q03403 129 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 PDE4CQ08493 712 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 GSE1Q14687 1217 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 VEPH1Q14D04 833 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 CTC1Q2NKJ3 1217 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 FIGNQ5HY92 759 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 ARHGAP17Q68EM7 881 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 SYCE2Q6PIF2 218 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 GPRIN1Q7Z2K8 1008 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 GRASPQ7Z6J2 395 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-208ENST00000558970 ELMOD1Q8N336 334 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 ZMIZ2Q8NF64 920 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 EPS8L1Q8TE68 723 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 ABCB6Q9NP58 842 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 ST7Q9NRC1 585 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 THEGQ9P2T0 379 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 ANAPC1Q9H1A4 1944 aa13.15□□□□□ -0.3
GABPB1-208ENST00000558970 A0A1W2PQJ5 194 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 SLC38A8A6NNN8 435 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 TRIM66O15016 1216 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 MFAP3LO75121 409 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 XYLBO75191 536 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 MYL4P12829 197 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 LCP1P13796 627 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 MAGEA11P43364 429 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 BCAT1P54687 386 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 SLC8A3P57103 927 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 BPIFB4P59827 614 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 USP46P62068 366 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 RPL10AP62906 217 aaKnown RBP13.14□□□□□ -0.31
GABPB1-208ENST00000558970 ZBED6P86452 979 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 BST2Q10589 180 aaKnown RBP13.14□□□□□ -0.31
GABPB1-208ENST00000558970 TRIM14Q14142 442 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 TDRD12Q587J7 1177 aaKnown RBP13.14□□□□□ -0.31
GABPB1-208ENST00000558970 LCLAT1Q6UWP7 414 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 VSTM1Q6UX27 236 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 TMEM184AQ6ZMB5 413 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 ANKRD52Q8NB46 1076 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 C1orf131Q8NDD1 294 aaKnown RBP13.14□□□□□ -0.31
GABPB1-208ENST00000558970 HLA-CQ95604 372 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 ZNF707Q96C28 371 aaPredicted RBP13.14□□□□□ -0.31
GABPB1-208ENST00000558970 ZNF512Q96ME7 567 aaPredicted RBP13.14□□□□□ -0.31
GABPB1-208ENST00000558970 DUSP16Q9BY84 665 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 PRKD2Q9BZL6 878 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 ZDHHC7Q9NXF8 308 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 CD207Q9UJ71 328 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 KIAA1257Q9ULG3 409 aa13.14□□□□□ -0.31
GABPB1-208ENST00000558970 NCK2O43639 380 aa13.13□□□□□ -0.31
GABPB1-208ENST00000558970 PLEKP08567 350 aaPredicted RBP13.13□□□□□ -0.31
GABPB1-208ENST00000558970 GJA1P17302 382 aa13.13□□□□□ -0.31
GABPB1-208ENST00000558970 SLC5A3P53794 718 aa13.13□□□□□ -0.31
GABPB1-208ENST00000558970 KLHL30Q0D2K2 578 aa13.13□□□□□ -0.31
GABPB1-208ENST00000558970 STILQ15468 1287 aa13.13□□□□□ -0.31
GABPB1-208ENST00000558970 CNGA2Q16280 664 aa13.13□□□□□ -0.31
GABPB1-208ENST00000558970 CES5AQ6NT32 575 aa13.13□□□□□ -0.31
GABPB1-208ENST00000558970 DENND5BQ6ZUT9 1274 aa13.13□□□□□ -0.31
GABPB1-208ENST00000558970 PIGZQ86VD9 579 aa13.13□□□□□ -0.31
GABPB1-208ENST00000558970 SCAMP5Q8TAC9 235 aa13.13□□□□□ -0.31
GABPB1-208ENST00000558970 HDAC7Q8WUI4 952 aa13.13□□□□□ -0.31
GABPB1-208ENST00000558970 ING5Q8WYH8 240 aa13.13□□□□□ -0.31
GABPB1-208ENST00000558970 HAUS4Q9H6D7 363 aa13.13□□□□□ -0.31
GABPB1-208ENST00000558970 ZNF334Q9HCZ1 680 aaPredicted RBP13.13□□□□□ -0.31
GABPB1-208ENST00000558970 DNMT3BQ9UBC3 853 aaKnown RBP13.13□□□□□ -0.31
GABPB1-208ENST00000558970 NOCTQ9UK39 431 aaKnown RBP13.13□□□□□ -0.31
GABPB1-208ENST00000558970 MAFFQ9ULX9 164 aa13.13□□□□□ -0.31
GABPB1-208ENST00000558970 HELZP42694 1942 aaKnown RBP13.12□□□□□ -0.31
GABPB1-208ENST00000558970 TMCO5BA8MYB1 307 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 AKR1B15C9JRZ8 316 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-208ENST00000558970 ABL1P00519 1130 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 HNRNPA1P09651 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
GABPB1-208ENST00000558970 HOXB8P17481 243 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-208ENST00000558970 PTPN2P17706 415 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 CHRNB2P17787 502 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 MRE11P49959 708 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 FMO1Q01740 532 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 CDR2Q01850 454 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 ADIGQ0VDE8 80 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 TBX2Q13207 712 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-208ENST00000558970 PABPC1LQ4VXU2 614 aaKnown RBP13.12□□□□□ -0.31
GABPB1-208ENST00000558970 C2CD6Q53TS8 623 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 PMF1Q6P1K2 205 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 GET4Q7L5D6 327 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-208ENST00000558970 IRF2BP2Q7Z5L9 587 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 DNAJB7Q7Z6W7 309 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-208ENST00000558970 ITIH5Q86UX2 942 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 NUP93Q8N1F7 819 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 CPA5Q8WXQ8 436 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 DDX1Q92499 740 aaKnown RBP13.12□□□□□ -0.31
GABPB1-208ENST00000558970 IQCDQ96DY2 449 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 MSLNLQ96KJ4 702 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 C8orf48Q96LL4 319 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 AGPAT1Q99943 283 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 EDEM3Q9BZQ6 932 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 MIS12Q9H081 205 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 CSNK1G1Q9HCP0 422 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 ASAH2Q9NR71 780 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 ABHD10Q9NUJ1 306 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 HSFX1Q9UBD0 423 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms