RNA–Protein interactions for RNA: ENST00000526760.5

BBS1-210, Transcript of Bardet-Biedl syndrome 1, human

TSL 2

Gene BBS1, Length 3,585 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-210	ENST00000526760	DRG1	Q9Y295	367 aa	Known RBP	11.17	□□□□□ -0.62
BBS1-210	ENST00000526760	SNX9	Q9Y5X1	595 aa		11.17	□□□□□ -0.62
BBS1-210	ENST00000526760	NR2E3	Q9Y5X4	410 aa		11.17	□□□□□ -0.62
BBS1-210	ENST00000526760	TRIP11	Q15643	1979 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760		F5H423	210 aa	Predicted RBP	11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	ITGAV	P06756	1048 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	KRT7	P08729	469 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	KRT4	P19013	534 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	ADORA2A	P29274	412 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	KCNJ2	P63252	427 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	SLC1A5	Q15758	541 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	ARHGEF18	Q6ZSZ5	1173 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	FBXO36	Q8NEA4	188 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	MAK16	Q9BXY0	300 aa	Known RBP	11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	CCDC134	Q9H6E4	229 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	DPP3	Q9NY33	737 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	BAIAP2L1	Q9UHR4	511 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	CLUH	O75153	1309 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	FAM47DP	A6NHR8	397 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	GAS2	O43903	313 aa	Known RBP	11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	TAC1	P20366	129 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	OSBP	P22059	807 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	MORF4L2	Q15014	288 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	E2F5	Q15329	346 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	PPP6R3	Q5H9R7	873 aa	Predicted RBP	11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	DARS2	Q6PI48	645 aa	Known RBP	11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	SPATA21	Q7Z572	469 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	IGDCC3	Q8IVU1	814 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	FITM2	Q8N6M3	262 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	CCDC63	Q8NA47	563 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	CXorf38	Q8TB03	319 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	WDR83	Q9BRX9	315 aa	Known RBP	11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	PCDH9	Q9HC56	1237 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	SETD4	Q9NVD3	440 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	MYO18A	Q92614	2054 aa	Known RBP	11.16	□□□□□ -0.62
BBS1-210	ENST00000526760		H3BRB1	525 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760		H7C0C1	242 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	ALOX15B	O15296	676 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	PDGFRB	P09619	1106 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	TFE3	P19532	575 aa	Predicted RBP	11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	ATP5O	P48047	213 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	GTF2A1	P52655	376 aa	Predicted RBP	11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	ATXN1	P54253	815 aa	Known RBP	11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	COPS2	P61201	443 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	TAP1	Q03518	808 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	MGAT5	Q09328	741 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	PMF1	Q6P1K2	205 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	FAM183BP	Q6ZVS7	135 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	PALM2	Q8IXS6	379 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	NIPA2	Q8N8Q9	360 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	FBF1	Q8TES7	1133 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	TBC1D31	Q96DN5	1066 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	LHX5	Q9H2C1	402 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	TUT1	Q9H6E5	874 aa	Known RBP	11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	CDHR5	Q9HBB8	845 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	EURL	Q9NYK6	297 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	LGALS13	Q9UHV8	139 aa		11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	XPO7	Q9UIA9	1087 aa	Known RBP	11.16	□□□□□ -0.62
BBS1-210	ENST00000526760	SCN1A	P35498	2009 aa		11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	SUN1	O94901	812 aa		11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	TRUB2	O95900	331 aa	Known RBP	11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	LACTB2	Q53H82	288 aa	Predicted RBP	11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	PPP1R2P3	Q6NXS1	205 aa		11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	TAPT1	Q6NXT6	567 aa		11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	DRICH1	Q6PGQ1	229 aa	Predicted RBP	11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	BBS12	Q6ZW61	710 aa		11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	SESTD1	Q86VW0	696 aa		11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	ACAP3	Q96P50	834 aa		11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	SNTG2	Q9NY99	539 aa		11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	STK38L	Q9Y2H1	464 aa		11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	TCEA3	O75764	348 aa		11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	IL18RAP	O95256	599 aa		11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	ITIH4	Q14624	930 aa		11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	C18orf25	Q96B23	403 aa	Predicted RBP	11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	ZMAT2	Q96NC0	199 aa	Known RBP	11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	SMC6	Q96SB8	1091 aa		11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	MRPL45	Q9BRJ2	306 aa	Known RBP	11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	TRIM56	Q9BRZ2	755 aa	Known RBP	11.15	□□□□□ -0.62
BBS1-210	ENST00000526760	FGFR1	P11362	822 aa		11.15	□□□□□ -0.63
BBS1-210	ENST00000526760	AKAP5	P24588	427 aa		11.15	□□□□□ -0.63
BBS1-210	ENST00000526760	IL9R	Q01113	521 aa		11.15	□□□□□ -0.63
BBS1-210	ENST00000526760	ZNF268	Q14587	947 aa	Predicted RBP	11.15	□□□□□ -0.63
BBS1-210	ENST00000526760	SMAD1	Q15797	465 aa	Known RBP	11.15	□□□□□ -0.63
BBS1-210	ENST00000526760	CA9	Q16790	459 aa		11.15	□□□□□ -0.63
BBS1-210	ENST00000526760	C9orf131	Q5VYM1	1079 aa		11.15	□□□□□ -0.63
BBS1-210	ENST00000526760	FAM228A	Q86W67	206 aa		11.15	□□□□□ -0.63
BBS1-210	ENST00000526760	PARP9	Q8IXQ6	854 aa		11.15	□□□□□ -0.63
BBS1-210	ENST00000526760	CCHCR1	Q8TD31	782 aa		11.15	□□□□□ -0.63
BBS1-210	ENST00000526760	KLK14	Q9P0G3	267 aa		11.15	□□□□□ -0.63
BBS1-210	ENST00000526760	WDR90	Q96KV7	1748 aa		11.14	□□□□□ -0.63
BBS1-210	ENST00000526760	NPTXR	O95502	500 aa		11.14	□□□□□ -0.63
BBS1-210	ENST00000526760	GOLGA7B	Q2TAP0	167 aa		11.14	□□□□□ -0.63
BBS1-210	ENST00000526760	PRAMEF19	Q5SWL8	479 aa		11.14	□□□□□ -0.63
BBS1-210	ENST00000526760	POLN	Q7Z5Q5	900 aa		11.14	□□□□□ -0.63
BBS1-210	ENST00000526760	PPIL6	Q8IXY8	311 aa		11.14	□□□□□ -0.63
BBS1-210	ENST00000526760	EXOC8	Q8IYI6	725 aa		11.14	□□□□□ -0.63
BBS1-210	ENST00000526760	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms