RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 ACOT1Q86TX2 421 aa26.05■■□□□ 1.76
SNF8-213ENST00000514929 CCDC150Q8NCX0 1101 aa26.05■■□□□ 1.76
SNF8-213ENST00000514929 TTC16Q8NEE8 873 aa26.05■■□□□ 1.76
SNF8-213ENST00000514929 TAS1R2Q8TE23 839 aa26.05■■□□□ 1.76
SNF8-213ENST00000514929 CYP2S1Q96SQ9 504 aa26.05■■□□□ 1.76
SNF8-213ENST00000514929 TTLL2Q9BWV7 592 aa26.05■■□□□ 1.76
SNF8-213ENST00000514929 TMEM8AQ9HCN3 771 aa26.05■■□□□ 1.76
SNF8-213ENST00000514929 ZNF638Q14966 1978 aaKnown RBP26.05■■□□□ 1.76
SNF8-213ENST00000514929 GREB1Q4ZG55 1949 aa26.04■■□□□ 1.76
SNF8-213ENST00000514929 SPECC1L-ADORA2AF8WAN1 911 aa26.04■■□□□ 1.76
SNF8-213ENST00000514929 SP9P0CG40 484 aa26.04■■□□□ 1.76
SNF8-213ENST00000514929 ASPAP45381 313 aa26.04■■□□□ 1.76
SNF8-213ENST00000514929 NDST1P52848 882 aa26.04■■□□□ 1.76
SNF8-213ENST00000514929 FZD5Q13467 585 aa26.04■■□□□ 1.76
SNF8-213ENST00000514929 ITPRIPL2Q3MIP1 535 aa26.04■■□□□ 1.76
SNF8-213ENST00000514929 FAM35AQ86V20 835 aa26.04■■□□□ 1.76
SNF8-213ENST00000514929 RALGPS2Q86X27 583 aaPredicted RBP26.04■■□□□ 1.76
SNF8-213ENST00000514929 ZNF687Q8N1G0 1237 aa26.04■■□□□ 1.76
SNF8-213ENST00000514929 ARL14EPQ8N8R7 260 aaPredicted RBP26.04■■□□□ 1.76
SNF8-213ENST00000514929 SLC22A12Q96S37 553 aa26.04■■□□□ 1.76
SNF8-213ENST00000514929 LMAN1LQ9HAT1 526 aa26.04■■□□□ 1.76
SNF8-213ENST00000514929 TMEM30AQ9NV96 361 aa26.04■■□□□ 1.76
SNF8-213ENST00000514929 C2orf78A6NCI8 922 aa26.03■■□□□ 1.76
SNF8-213ENST00000514929 HDCP19113 662 aa26.03■■□□□ 1.76
SNF8-213ENST00000514929 TRIM21P19474 475 aaKnown RBP26.03■■□□□ 1.76
SNF8-213ENST00000514929 GTF2H1P32780 548 aa26.03■■□□□ 1.76
SNF8-213ENST00000514929 CTHP32929 405 aa26.03■■□□□ 1.76
SNF8-213ENST00000514929 PDE6CP51160 858 aa26.03■■□□□ 1.76
SNF8-213ENST00000514929 IFRD2Q12894 506 aaPredicted RBP26.03■■□□□ 1.76
SNF8-213ENST00000514929 ORC1Q13415 861 aa26.03■■□□□ 1.76
SNF8-213ENST00000514929 KRT39Q6A163 491 aa26.03■■□□□ 1.76
SNF8-213ENST00000514929 UNC93AQ86WB7 457 aa26.03■■□□□ 1.76
SNF8-213ENST00000514929 NKD2Q969F2 451 aaPredicted RBP26.03■■□□□ 1.76
SNF8-213ENST00000514929 PATJQ8NI35 1801 aa26.02■■□□□ 1.76
SNF8-213ENST00000514929 STX10O60499 249 aa26.02■■□□□ 1.76
SNF8-213ENST00000514929 PPP3CCP48454 512 aa26.02■■□□□ 1.76
SNF8-213ENST00000514929 FKBP3Q00688 224 aaKnown RBP26.02■■□□□ 1.76
SNF8-213ENST00000514929 STIM1Q13586 685 aa26.02■■□□□ 1.76
SNF8-213ENST00000514929 ANKRD40Q6AI12 368 aa26.02■■□□□ 1.76
SNF8-213ENST00000514929 ISM2Q6H9L7 571 aa26.02■■□□□ 1.76
SNF8-213ENST00000514929 ELOA2Q8IYF1 753 aaPredicted RBP26.02■■□□□ 1.76
SNF8-213ENST00000514929 MAML2Q8IZL2 1156 aaPredicted RBP26.02■■□□□ 1.76
SNF8-213ENST00000514929 ADSSL1Q8N142 457 aa26.02■■□□□ 1.76
SNF8-213ENST00000514929 NUP93Q8N1F7 819 aa26.02■■□□□ 1.76
SNF8-213ENST00000514929 SMARCD1Q96GM5 515 aa26.02■■□□□ 1.76
SNF8-213ENST00000514929 SLITRK1Q96PX8 696 aa26.02■■□□□ 1.76
SNF8-213ENST00000514929 FAM83CQ9BQN1 747 aa26.02■■□□□ 1.76
SNF8-213ENST00000514929 GCNT4Q9P109 453 aa26.02■■□□□ 1.76
SNF8-213ENST00000514929 HMGXB4Q9UGU5 601 aa26.02■■□□□ 1.76
SNF8-213ENST00000514929 FBXO4Q9UKT5 387 aa26.02■■□□□ 1.76
SNF8-213ENST00000514929 GADD45BO75293 160 aaPredicted RBP26.01■■□□□ 1.75
SNF8-213ENST00000514929 ABL1P00519 1130 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 F5P12259 2224 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 MXI1P50539 228 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 LRRC63Q05C16 580 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 TAF10Q12962 218 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 RUNX3Q13761 415 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 MTF1Q14872 753 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 TRIM68Q6AZZ1 485 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 ZC3H14Q6PJT7 736 aaKnown RBP26.01■■□□□ 1.75
SNF8-213ENST00000514929 TXNDC11Q6PKC3 985 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 PAQR9Q6ZVX9 377 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 ASCL5Q7RTU5 278 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 FUKQ8N0W3 1084 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 CRYBG2Q8N1P7 616 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 RIN3Q8TB24 985 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 KCNK16Q96T55 309 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 NIF3L1Q9GZT8 377 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 CHRDQ9H2X0 955 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 EBF3Q9H4W6 596 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 CYP3A43Q9HB55 503 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 APOBEC3GQ9HC16 384 aaKnown RBP26.01■■□□□ 1.75
SNF8-213ENST00000514929 DMAP1Q9NPF5 467 aaPredicted RBP26.01■■□□□ 1.75
SNF8-213ENST00000514929 KRT82Q9NSB4 513 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 R4GN57 208 aa26.01■■□□□ 1.75
SNF8-213ENST00000514929 KIF26AQ9ULI4 1882 aaPredicted RBP26■■□□□ 1.75
SNF8-213ENST00000514929 PSMA7O14818 248 aa26■■□□□ 1.75
SNF8-213ENST00000514929 AP1G2O75843 785 aa26■■□□□ 1.75
SNF8-213ENST00000514929 RTN3O95197 1032 aaPredicted RBP26■■□□□ 1.75
SNF8-213ENST00000514929 CHRNB1P11230 501 aa26■■□□□ 1.75
SNF8-213ENST00000514929 CCDC130P13994 396 aa26■■□□□ 1.75
SNF8-213ENST00000514929 PFKLP17858 780 aa26■■□□□ 1.75
SNF8-213ENST00000514929 PMS1P54277 932 aaKnown RBP26■■□□□ 1.75
SNF8-213ENST00000514929 CSTF1Q05048 431 aaKnown RBP26■■□□□ 1.75
SNF8-213ENST00000514929 MTAPQ13126 283 aa26■■□□□ 1.75
SNF8-213ENST00000514929 LRRC32Q14392 662 aa26■■□□□ 1.75
SNF8-213ENST00000514929 TCERG1LQ5VWI1 586 aa26■■□□□ 1.75
SNF8-213ENST00000514929 IER2Q9BTL4 223 aa26■■□□□ 1.75
SNF8-213ENST00000514929 MAN1B1Q9UKM7 699 aa26■■□□□ 1.75
SNF8-213ENST00000514929 ANAPC1Q9H1A4 1944 aa26■■□□□ 1.75
SNF8-213ENST00000514929 TRIM49BA6NDI0 452 aa25.99■■□□□ 1.75
SNF8-213ENST00000514929 ZNF840PA6NDX5 716 aa25.99■■□□□ 1.75
SNF8-213ENST00000514929 PRR23AA6NEV1 266 aa25.99■■□□□ 1.75
SNF8-213ENST00000514929 SLC16A3O15427 465 aaKnown RBP25.99■■□□□ 1.75
SNF8-213ENST00000514929 YWHAQP27348 245 aa25.99■■□□□ 1.75
SNF8-213ENST00000514929 MCCD1P59942 119 aaPredicted RBP25.99■■□□□ 1.75
SNF8-213ENST00000514929 INCA1Q0VD86 236 aa25.99■■□□□ 1.75
SNF8-213ENST00000514929 PON2Q15165 354 aa25.99■■□□□ 1.75
SNF8-213ENST00000514929 PDGFRLQ15198 375 aa25.99■■□□□ 1.75
SNF8-213ENST00000514929 ZNF77Q15935 545 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms