RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TNIP3Q96KP6 325 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 CEP295NLQ96MC4 621 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 IPO9Q96P70 1041 aaKnown RBP16.23■□□□□ 0.19
PRKN-201ENST00000338468 GCNAQ96QF7 691 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 DDX23Q9BUQ8 820 aaKnown RBP16.23■□□□□ 0.19
PRKN-201ENST00000338468 TRMT61BQ9BVS5 477 aaKnown RBP16.23■□□□□ 0.19
PRKN-201ENST00000338468 TTLL2Q9BWV7 592 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 IMPG2Q9BZV3 1241 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 SMG9Q9H0W8 520 aaKnown RBP16.23■□□□□ 0.19
PRKN-201ENST00000338468 TBC1D17Q9HA65 648 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 CYP3A43Q9HB55 503 aa16.23■□□□□ 0.19
PRKN-201ENST00000338468 UXTQ9UBK9 157 aaPredicted RBP16.23■□□□□ 0.19
PRKN-201ENST00000338468 STK25O00506 426 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 TRIM66O15016 1216 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 CILPO75339 1184 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 CCDC130P13994 396 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 STARD6P59095 220 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 PFKPQ01813 784 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 FCHO2Q0JRZ9 810 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 PHLDB3Q6NSJ2 640 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 DENND5BQ6ZUT9 1274 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 MON1AQ86VX9 555 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 CMTM8Q8IZV2 173 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 MAB21L3Q8N8X9 362 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 RIN3Q8TB24 985 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 DEPDC1BQ8WUY9 529 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 E2F7Q96AV8 911 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 KCNK16Q96T55 309 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 ARID3AQ99856 593 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 METTL14Q9HCE5 456 aaKnown RBP16.22■□□□□ 0.19
PRKN-201ENST00000338468 CCL26Q9Y258 94 aa16.22■□□□□ 0.19
PRKN-201ENST00000338468 ANAPC1Q9H1A4 1944 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 BICDL2A1A5D9 508 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 BEST1O76090 585 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 CD58P19256 250 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 DDX6P26196 483 aaKnown RBP eCLIP16.21■□□□□ 0.19
PRKN-201ENST00000338468 ANXA13P27216 316 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 GDI1P31150 447 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 MLF2Q15773 248 aaPredicted RBP16.21■□□□□ 0.19
PRKN-201ENST00000338468 DGLUCYQ7Z3D6 616 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 ZMIZ2Q8NF64 920 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 SLC2A14Q8TDB8 520 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 MRPS31Q92665 395 aaKnown RBP16.21■□□□□ 0.19
PRKN-201ENST00000338468 DNASE1L2Q92874 299 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 USP13Q92995 863 aaPredicted RBP16.21■□□□□ 0.19
PRKN-201ENST00000338468 RMDN1Q96DB5 314 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 FAXDC2Q96IV6 333 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 SLC22A12Q96S37 553 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 SMOQ99835 787 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 FOXQ1Q9C009 403 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 BRD9Q9H8M2 597 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 TRPV5Q9NQA5 729 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 OBP2AQ9NY56 170 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 GCNT4Q9P109 453 aa16.21■□□□□ 0.19
PRKN-201ENST00000338468 KIF26AQ9ULI4 1882 aaPredicted RBP16.2■□□□□ 0.18
PRKN-201ENST00000338468 ZNF638Q14966 1978 aaKnown RBP16.2■□□□□ 0.18
PRKN-201ENST00000338468 TICRRQ7Z2Z1 1910 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 SOBPA7XYQ1 873 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 TNFRSF10BO14763 440 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 FMO5P49326 533 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 MARSP56192 900 aaKnown RBP16.2■□□□□ 0.18
PRKN-201ENST00000338468 PRKCQQ04759 706 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 CCDC40Q4G0X9 1142 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 ZC3H14Q6PJT7 736 aaKnown RBP16.2■□□□□ 0.18
PRKN-201ENST00000338468 TRIM59Q8IWR1 403 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 CCDC150Q8NCX0 1101 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 SMARCD1Q96GM5 515 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 HINFPQ9BQA5 517 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 NT5C1AQ9BXI3 368 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 SRRTQ9BXP5 876 aaKnown RBP16.2■□□□□ 0.18
PRKN-201ENST00000338468 CSNK1G1Q9HCP0 422 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 HEBP1Q9NRV9 189 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 KRT82Q9NSB4 513 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 CISHQ9NSE2 258 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 FAM49BQ9NUQ9 324 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 IL37Q9NZH6 218 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 DLGAP2Q9P1A6 1054 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 RWDD2AQ9UIY3 292 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 ZMYM5Q9UJ78 669 aa16.2■□□□□ 0.18
PRKN-201ENST00000338468 MTF2Q9Y483 593 aaPredicted RBP16.2■□□□□ 0.18
PRKN-201ENST00000338468 C2orf78A6NCI8 922 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 ZNF263O14978 683 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 PMM2O15305 246 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 CHADO15335 359 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 AP1G2O75843 785 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 GLULP15104 373 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 CD72P21854 359 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 KIAA2013Q8IYS2 634 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 CELF5Q8N6W0 485 aaKnown RBP16.19■□□□□ 0.18
PRKN-201ENST00000338468 SCAMP5Q8TAC9 235 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 LMO3Q8TAP4 145 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 GPT2Q8TD30 523 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 IRF7Q92985 503 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 ZFYVE19Q96K21 471 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 CYP2S1Q96SQ9 504 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 HNRNPABQ99729 332 aaKnown RBP16.19■□□□□ 0.18
PRKN-201ENST00000338468 MED10Q9BTT4 135 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 DMAP1Q9NPF5 467 aaPredicted RBP16.19■□□□□ 0.18
PRKN-201ENST00000338468 R4GN57 208 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 DNAH14Q0VDD8 3507 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms