RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 ZNF394Q53GI3 561 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 EID3Q8N140 333 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 VTI1BQ9UEU0 232 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 SLC24A2Q9UI40 661 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 IPPQ9Y573 584 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 LMTK3Q96Q04 1460 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 NPM3O75607 178 aaKnown RBP20.06■□□□□ 0.8
HDAC4-215ENST00000543185 TGM2P21980 687 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 FASP25445 335 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 EIF2AK1Q9BQI3 630 aaKnown RBP20.06■□□□□ 0.8
HDAC4-215ENST00000543185 THUMPD3Q9BV44 507 aaKnown RBP20.06■□□□□ 0.8
HDAC4-215ENST00000543185 CD3EAPO15446 510 aaKnown RBP20.06■□□□□ 0.8
HDAC4-215ENST00000543185 CACNA2D1P54289 1103 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 AREL1O15033 823 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 VEPH1Q14D04 833 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 SCN4BQ8IWT1 228 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 SETBP1Q9Y6X0 1596 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 TMEM253P0C7T8 217 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 SLC2A3P11169 496 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 TTC27Q6P3X3 843 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 MRPL39Q9NYK5 338 aaKnown RBP20.06■□□□□ 0.8
HDAC4-215ENST00000543185 LRRC7Q96NW7 1537 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 VWA5AO00534 786 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 ACTRT1Q8TDG2 376 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 S100ZQ8WXG8 99 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 RNFT2Q96EX2 444 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 TIMMDC1Q9NPL8 285 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 FBXO28Q9NVF7 368 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 NEDD4P46934 1319 aa20.06■□□□□ 0.8
HDAC4-215ENST00000543185 SPACA6W5XKT8 324 aa20.05■□□□□ 0.8
HDAC4-215ENST00000543185 RARGP13631 454 aa20.05■□□□□ 0.8
HDAC4-215ENST00000543185 IARS2Q9NSE4 1012 aaKnown RBP20.05■□□□□ 0.8
HDAC4-215ENST00000543185 SLC16A4O15374 487 aa20.05■□□□□ 0.8
HDAC4-215ENST00000543185 DNAJC3Q13217 504 aa20.05■□□□□ 0.8
HDAC4-215ENST00000543185 CAMKK2Q96RR4 588 aa20.05■□□□□ 0.8
HDAC4-215ENST00000543185 SRPK1Q96SB4 655 aaKnown RBP20.05■□□□□ 0.8
HDAC4-215ENST00000543185 IGSF9BQ9UPX0 1349 aa20.05■□□□□ 0.8
HDAC4-215ENST00000543185 ZCCHC18P0CG32 403 aa20.05■□□□□ 0.8
HDAC4-215ENST00000543185 SULT1E1P49888 294 aa20.05■□□□□ 0.8
HDAC4-215ENST00000543185 ADARP55265 1226 aaKnown RBP20.05■□□□□ 0.8
HDAC4-215ENST00000543185 RBM46Q8TBY0 533 aaKnown RBP20.05■□□□□ 0.8
HDAC4-215ENST00000543185 ATP9BO43861 1147 aa20.05■□□□□ 0.8
HDAC4-215ENST00000543185 OTUD4Q01804 1114 aaKnown RBP20.05■□□□□ 0.8
HDAC4-215ENST00000543185 MZT2BQ6NZ67 158 aa20.05■□□□□ 0.8
HDAC4-215ENST00000543185 YTHDF3Q7Z739 585 aaKnown RBP20.05■□□□□ 0.8
HDAC4-215ENST00000543185 SLC38A7Q9NVC3 462 aa20.05■□□□□ 0.8
HDAC4-215ENST00000543185 MYL12AP19105 171 aa20.05■□□□□ 0.8
HDAC4-215ENST00000543185 YWHABP31946 246 aaKnown RBP20.05■□□□□ 0.8
HDAC4-215ENST00000543185 ERGIC2Q96RQ1 377 aa20.05■□□□□ 0.8
HDAC4-215ENST00000543185 H2AFXP16104 143 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-215ENST00000543185 SLC34A1Q06495 639 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 PRKG1Q13976 671 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 PHKG1Q16816 387 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 ZFYVE1Q9HBF4 777 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 TMEM8AQ9HCN3 771 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 SAR1AQ9NR31 198 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 LIN7AO14910 233 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-215ENST00000543185 EIF2AK2P19525 551 aaKnown RBP20.04■□□□□ 0.8
HDAC4-215ENST00000543185 BCAP31P51572 246 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 XRCC4Q13426 336 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 CRELD2Q6UXH1 353 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-215ENST00000543185 STKLD1Q8NE28 680 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 AP3S1Q92572 193 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 LARGE1O95461 756 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 AKT1P31749 480 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 CRKLP46109 303 aaKnown RBP20.04■□□□□ 0.8
HDAC4-215ENST00000543185 ZNF341Q9BYN7 854 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 C8orf4Q9NR00 106 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 EEF2KO00418 725 aaKnown RBP20.04■□□□□ 0.8
HDAC4-215ENST00000543185 HSMCR30P0CW71 290 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 SNRNP35Q16560 246 aaKnown RBP20.04■□□□□ 0.8
HDAC4-215ENST00000543185 NDUFAF6Q330K2 333 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 FAM180AQ6UWF9 173 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 PPP2R1BP30154 601 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 MCAMP43121 646 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 MAD2L1Q13257 205 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-215ENST00000543185 PDCD10Q9BUL8 212 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 HEY2Q9UBP5 337 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 NEO1Q92859 1461 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 FAM220BPB1ANY3 271 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 SERPINB5P36952 375 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 ARPP19P56211 112 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 TMPRSS6Q8IU80 811 aa20.04■□□□□ 0.8
HDAC4-215ENST00000543185 KCTD14Q9BQ13 255 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-215ENST00000543185 KDM6AO15550 1401 aaPredicted RBP20.04■□□□□ 0.8
HDAC4-215ENST00000543185 ABLIM1O14639 778 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 TSC22D2O75157 780 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 DGAT1O75907 488 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 RBP1P09455 135 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 CRKP46108 304 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 MROH7Q68CQ1 1323 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 IGSF1Q8N6C5 1336 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 SDR42E2A6NKP2 422 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 GYPCP04921 128 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 SLC16A1P53985 500 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 PPIDQ08752 370 aaKnown RBP20.03■□□□□ 0.8
HDAC4-215ENST00000543185 ITGA9Q13797 1035 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 TPCN2Q8NHX9 752 aa20.03■□□□□ 0.8
HDAC4-215ENST00000543185 ATXN2LQ8WWM7 1075 aaKnown RBP20.03■□□□□ 0.8
HDAC4-215ENST00000543185 SH3BP4Q9P0V3 963 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms