RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 AGAP1Q9UPQ3 857 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 BACE2Q9Y5Z0 518 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 CITO14578 2027 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 GOLGA6L6A8MZA4 724 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 H7C4K7 107 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 CYB561D2O14569 222 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 OAZ2O95190 189 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 ECEL1O95672 775 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 GLP2RO95838 553 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 CYP11A1P05108 521 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 ADH1AP07327 375 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 KRT19P08727 400 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 FOSL1P15407 271 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 CD53P19397 219 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 TYMPP19971 482 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 POLR2BP30876 1174 aaKnown RBP6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 ETFBP38117 255 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 CLCN4P51793 760 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 NLRP12P59046 1061 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 CREMQ03060 361 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 DLX2Q07687 328 aaPredicted RBP6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 CCDC15Q0P6D6 951 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 PAK1Q13153 545 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 PSMD5Q16401 504 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 PROX2Q3B8N5 592 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 SV2CQ496J9 727 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 DNAJC21Q5F1R6 531 aaKnown RBP6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 C1orf220Q5T0J3 134 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 RSPO2Q6UXX9 243 aaPredicted RBP6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 DSTYKQ6XUX3 929 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 ERMP1Q7Z2K6 904 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 USP37Q86T82 979 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 FAM186BQ8IYM0 893 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 VN1R2Q8NFZ6 395 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 HNRNPLLQ8WVV9 542 aaKnown RBP6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 FAM84AQ96KN4 292 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 MED15Q96RN5 788 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 MUC3BQ9H195 1237 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 UBE2ZQ9H832 354 aaPredicted RBP6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 GDAP2Q9NXN4 497 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 CLEC1BQ9P126 229 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 MTRRQ9UBK8 725 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 RWDD2AQ9UIY3 292 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 STRIP2Q9ULQ0 834 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 TIMM13Q9Y5L4 95 aaPredicted RBP6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 HCFC2Q9Y5Z7 792 aa6.71□□□□□ -1.34
ATPAF1-209ENST00000529214 COL4A4P53420 1690 aaPredicted RBP6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 MYO7AQ13402 2215 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 SPTBN5Q9NRC6 3674 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 ARHGEF37A1IGU5 675 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 SLC16A3O15427 465 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 ADAM12O43184 909 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 TGM5O43548 720 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 MTA2O94776 668 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 ABLIM3O94929 683 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 STAU1O95793 577 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 FAM163BP0C2L3 166 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 EPB41P11171 864 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 KRT13P13646 458 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 TNNT1P13805 278 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 EPCAMP16422 314 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 HOXB8P17481 243 aaPredicted RBP6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 JUNDP17535 347 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 RPL17P18621 184 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 MAN1A1P33908 653 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 OR1D2P34982 312 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 NDUFV1P49821 464 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 STX17P56962 302 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 TFF2Q03403 129 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 YWHAHQ04917 246 aaPredicted RBP6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 PPP3CAQ08209 521 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 BFSP1Q12934 665 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 MYO1EQ12965 1108 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 ZACNQ401N2 412 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 TDRD10Q5VZ19 366 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 ZNF787Q6DD87 383 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 SLC8B1Q6J4K2 584 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 ANKRD54Q6NXT1 300 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 RNF19BQ6ZMZ0 732 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 C15orf39Q6ZRI6 1047 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 NYAP1Q6ZVC0 841 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 SV2AQ7L0J3 742 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 FRMD5Q7Z6J6 570 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 PALB2Q86YC2 1186 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 MYO1HQ8N1T3 1032 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 PGBD3Q8N328 593 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 ZNF461Q8TAF7 563 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 HDAC7Q8WUI4 952 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 ATXN2LQ8WWM7 1075 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 TAF4BQ92750 862 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 CASP10Q92851 521 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 HPDLQ96IR7 371 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 MSLNLQ96KJ4 702 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 ZNF560Q96MR9 790 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 SRRTQ9BXP5 876 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 OXCT2Q9BYC2 517 aaPredicted RBP6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 TMEM63CQ9P1W3 806 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 CALCOCO1Q9P1Z2 691 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 FBXL5Q9UKA1 691 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms