RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 COQ4Q9Y3A0 265 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 MUC6Q6W4X9 2439 aa17.19■□□□□ 0.34
PDLIM5-212ENST00000509333 STX10O60499 249 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 PIK3CAP42336 1068 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 NDST1P52848 882 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 CACNA2D1P54289 1103 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 CYP4F8P98187 520 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 PFKPQ01813 784 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 GRM2Q14416 872 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 CWF19L1Q69YN2 538 aaKnown RBP17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 TXNDC8Q6A555 127 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 KLHL10Q6JEL2 608 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 ACOT1Q86TX2 421 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 TRIML1Q8N9V2 468 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 FBXL13Q8NEE6 735 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 TATDN2Q93075 761 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 FAXDC2Q96IV6 333 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 TNIP3Q96KP6 325 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 CEP63Q96MT8 703 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 DDX23Q9BUQ8 820 aaKnown RBP17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 ZNF518BQ9C0D4 1074 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 METTL14Q9HCE5 456 aaKnown RBP17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 TRPV5Q9NQA5 729 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 ARHGEF3Q9NR81 526 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 LMBRD1Q9NUN5 540 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 UXTQ9UBK9 157 aaPredicted RBP17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 ZMYM5Q9UJ78 669 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 NCANO14594 1321 aa17.18■□□□□ 0.34
PDLIM5-212ENST00000509333 SHISA7A6NL88 538 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 F8VP50 259 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 AOC1P19801 751 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 GDI1P31150 447 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 NUBP1P53384 320 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 USP46P62068 366 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 NOP14P78316 857 aaKnown RBP17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 C1QBPQ07021 282 aaKnown RBP17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 CBWD6Q4V339 395 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 CBWD3Q5JTY5 395 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 CBWD5Q5RIA9 395 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 SCARA5Q6ZMJ2 495 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 CMTM8Q8IZV2 173 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 FUKQ8N0W3 1084 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 MAB21L3Q8N8X9 362 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 WHAMMQ8TF30 809 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 DEPDC1BQ8WUY9 529 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 IRF7Q92985 503 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 SLC35C1Q96A29 364 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 SHDQ96IW2 340 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 TWNKQ96RR1 684 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 KCNK16Q96T55 309 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 BRD9Q9H8M2 597 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 OBP2AQ9NY56 170 aa17.17■□□□□ 0.34
PDLIM5-212ENST00000509333 STK25O00506 426 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 TRIM66O15016 1216 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 DDX6P26196 483 aaKnown RBP eCLIP17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 MXI1P50539 228 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 STX17P56962 302 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 PRKCQQ04759 706 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 FCHO2Q0JRZ9 810 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 INCA1Q0VD86 236 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 DENND5BQ6ZUT9 1274 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 C12orf29Q8N999 325 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 MRPS31Q92665 395 aaKnown RBP17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 MED15Q96RN5 788 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 CYP2S1Q96SQ9 504 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 TTLL2Q9BWV7 592 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 SRRTQ9BXP5 876 aaKnown RBP17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 IMPG2Q9BZV3 1241 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 ELOVL4Q9GZR5 314 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 TBC1D17Q9HA65 648 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 IL37Q9NZH6 218 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 HMGXB4Q9UGU5 601 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 CACNA1HO95180 2353 aa17.16■□□□□ 0.34
PDLIM5-212ENST00000509333 BICDL2A1A5D9 508 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 ARNTLO00327 626 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 ZNF263O14978 683 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 PMM2O15305 246 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 CHADO15335 359 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 TADA3O75528 432 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 CLSTN1O94985 981 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 ANXA13P27216 316 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 ORC1Q13415 861 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 MLF2Q15773 248 aaPredicted RBP17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 TCERG1LQ5VWI1 586 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 CCDC150Q8NCX0 1101 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 PRSS33Q8NF86 280 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 DNASE1L2Q92874 299 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 USP13Q92995 863 aaPredicted RBP17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 IPO9Q96P70 1041 aaKnown RBP17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 GCNAQ96QF7 691 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 PRRX2Q99811 253 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 NIF3L1Q9GZT8 377 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 SMG9Q9H0W8 520 aaKnown RBP17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 CLSTN2Q9H4D0 955 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 GCNT4Q9P109 453 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 SIT1Q9Y3P8 196 aa17.15■□□□□ 0.34
PDLIM5-212ENST00000509333 KANSL1LA0AUZ9 987 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 DPYSL4O14531 572 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 TNFRSF10BO14763 440 aa17.14■□□□□ 0.33
PDLIM5-212ENST00000509333 CILPO75339 1184 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms