RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 RPL10AP62906 217 aaKnown RBP17.3■□□□□ 0.36
COL1A1-205ENST00000476387 FOXK2Q01167 660 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 LRRC32Q14392 662 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 ZNF699Q32M78 642 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 WDR72Q3MJ13 1102 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 CFAP221Q4G0U5 840 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 ZNF658Q5TYW1 1059 aaPredicted RBP17.3■□□□□ 0.36
COL1A1-205ENST00000476387 TDRD10Q5VZ19 366 aaKnown RBP17.3■□□□□ 0.36
COL1A1-205ENST00000476387 LIMS2Q7Z4I7 341 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 TMEM150AQ86TG1 271 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 CELF5Q8N6W0 485 aaKnown RBP17.3■□□□□ 0.36
COL1A1-205ENST00000476387 PLEKHO2Q8TD55 490 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 TMC2Q8TDI7 906 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 FUBP3Q96I24 572 aaKnown RBP eCLIP17.3■□□□□ 0.36
COL1A1-205ENST00000476387 SYT15Q9BQS2 421 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 PI4K2AQ9BTU6 479 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 SLC46A2Q9BY10 475 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 SNX25Q9H3E2 840 aa17.3■□□□□ 0.36
COL1A1-205ENST00000476387 THG1LQ9NWX6 298 aaKnown RBP17.3■□□□□ 0.36
COL1A1-205ENST00000476387 UXTQ9UBK9 157 aaPredicted RBP17.3■□□□□ 0.36
COL1A1-205ENST00000476387 NXF1Q9UBU9 619 aaKnown RBP17.3■□□□□ 0.36
COL1A1-205ENST00000476387 MYH10P35580 1976 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 SLC38A8A6NNN8 435 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 SPECC1L-ADORA2AF8WAN1 911 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 TDGF1P13385 188 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 WARSP23381 471 aaKnown RBP17.29■□□□□ 0.36
COL1A1-205ENST00000476387 CTHP32929 405 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 AVPR1AP37288 418 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 CLDN10P78369 228 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 ADAM9Q13443 819 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 NCOA4Q13772 614 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 MAPRE1Q15691 268 aaKnown RBP17.29■□□□□ 0.36
COL1A1-205ENST00000476387 EDRF1Q3B7T1 1238 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 C4orf50Q6ZRC1 276 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 INTS8Q75QN2 995 aaKnown RBP17.29■□□□□ 0.36
COL1A1-205ENST00000476387 SPATA2LQ8IUW3 424 aaPredicted RBP17.29■□□□□ 0.36
COL1A1-205ENST00000476387 GPIHBP1Q8IV16 184 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 FAM186BQ8IYM0 893 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 CMTM8Q8IZV2 173 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 KBTBD7Q8WVZ9 684 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 ERCC4Q92889 916 aaPredicted RBP17.29■□□□□ 0.36
COL1A1-205ENST00000476387 TRMT2BQ96GJ1 504 aaKnown RBP17.29■□□□□ 0.36
COL1A1-205ENST00000476387 TSG101Q99816 390 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 EPC1Q9H2F5 836 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 GTF3C4Q9UKN8 822 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 CDH9Q9ULB4 789 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 PCDHA5Q9Y5H7 936 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 CEP250Q9BV73 2442 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 GREB1Q4ZG55 1949 aa17.29■□□□□ 0.36
COL1A1-205ENST00000476387 CACNA1AO00555 2505 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 IKBKBO14920 756 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 HCRTO43612 131 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 TACC1O75410 805 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 AKAP3O75969 853 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 NOL4O94818 638 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 CYP2F1P24903 491 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 PSMC2P35998 433 aaKnown RBP17.28■□□□□ 0.36
COL1A1-205ENST00000476387 MAGEA11P43364 429 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 ID4P47928 161 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 GPR15P49685 360 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 VAMP7P51809 220 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 PSMC1P62191 440 aaKnown RBP17.28■□□□□ 0.36
COL1A1-205ENST00000476387 DLG4P78352 724 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 STIM1Q13586 685 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 ZCWPW2Q504Y3 356 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 ZNF667Q5HYK9 610 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 DGKKQ5KSL6 1271 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 FAM171BQ6P995 826 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 TSSK4Q6SA08 328 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 MON1AQ86VX9 555 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 ELOA2Q8IYF1 753 aaPredicted RBP17.28■□□□□ 0.36
COL1A1-205ENST00000476387 SPEM1Q8N4L4 309 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 OR6B3Q8NGW1 331 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 MRPS31Q92665 395 aaKnown RBP17.28■□□□□ 0.36
COL1A1-205ENST00000476387 ZFYVE19Q96K21 471 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 MYRFLQ96LU7 910 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 HINFPQ9BQA5 517 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 XYLT2Q9H1B5 865 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 KIF9Q9HAQ2 790 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 GTSE1Q9NYZ3 720 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 DMXL1Q9Y485 3027 aa17.28■□□□□ 0.36
COL1A1-205ENST00000476387 GADD45BO75293 160 aaPredicted RBP17.27■□□□□ 0.36
COL1A1-205ENST00000476387 C4BPAP04003 597 aaKnown RBP17.27■□□□□ 0.36
COL1A1-205ENST00000476387 PDGFRBP09619 1106 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 EPB41P11171 864 aaKnown RBP17.27■□□□□ 0.36
COL1A1-205ENST00000476387 P4HA1P13674 534 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 GNL1P36915 607 aaPredicted RBP17.27■□□□□ 0.36
COL1A1-205ENST00000476387 PIK3CAP42336 1068 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 PRCPP42785 496 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 SOX9P48436 509 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 ZNF268Q14587 947 aaPredicted RBP17.27■□□□□ 0.36
COL1A1-205ENST00000476387 DDR2Q16832 855 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 ITPRIPL2Q3MIP1 535 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 ZACNQ401N2 412 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 COBLL1Q53SF7 1204 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 MAB21L3Q8N8X9 362 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 SPATA20Q8TB22 786 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 CEP295NLQ96MC4 621 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 IMPG2Q9BZV3 1241 aa17.27■□□□□ 0.36
COL1A1-205ENST00000476387 SMG9Q9H0W8 520 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms