RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ALDH18A1P54886 795 aaKnown RBP6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 MYL6P60660 151 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 GTF2IP78347 998 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 C17orf67Q0P5P2 114 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 COASYQ13057 564 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 GRB10Q13322 594 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 PWP1Q13610 501 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 BMPR2Q13873 1038 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 COTL1Q14019 142 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 OXLD1Q5BKU9 147 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 IFIT1BQ5T764 474 aaKnown RBP6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 PKN3Q6P5Z2 889 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 AAGABQ6PD74 315 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 HHIPL2Q6UWX4 724 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 LRIG3Q6UXM1 1119 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 TRMT44Q8IYL2 757 aaKnown RBP6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 SYT2Q8N9I0 419 aaPredicted RBP6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 SLC26A7Q8TE54 656 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 BTN2A2Q8WVV5 523 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 LZICQ8WZA0 190 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 KIFAP3Q92845 792 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 PPP2R3CQ969Q6 453 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 L3MBTL2Q969R5 705 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 EFHD2Q96C19 240 aaPredicted RBP6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 TAAR9Q96RI9 348 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 KCTD15Q96SI1 283 aaPredicted RBP6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 NOC4LQ9BVI4 516 aaKnown RBP6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 TMEM120AQ9BXJ8 343 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 WDR6Q9NNW5 1121 aaKnown RBP6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 SERINC1Q9NRX5 453 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 GDAP2Q9NXN4 497 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 GPRC5DQ9NZD1 345 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 ANKFY1Q9P2R3 1169 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 FAM8A1Q9UBU6 413 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 RCOR1Q9UKL0 485 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 DOLKQ9UPQ8 538 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 PCDHGB6Q9Y5F9 930 aa6.42□□□□□ -1.38
SMARCE1-208ENST00000474246 USP9XQ93008 2570 aaPredicted RBP6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 EIF3CLB5ME19 914 aaKnown RBP6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 ST8SIA5O15466 376 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 CBFA2T3O75081 653 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 DDAH1O94760 285 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 ABCB1P08183 1280 aaPredicted RBP6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 CKMT1AP12532 417 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 PRKACBP22694 351 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 TM4SF1P30408 202 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 MAGEA9P43362 315 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 KRT17Q04695 432 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 FAM47CQ5HY64 1035 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 PAPD4Q6PIY7 484 aaKnown RBP6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 FAM160B2Q86V87 743 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 ERO1BQ86YB8 467 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 MFN1Q8IWA4 741 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 GJD3Q8N144 294 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 ZBTB38Q8NAP3 1195 aaPredicted RBP6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 GOLM1Q8NBJ4 401 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 TRAPPC12Q8WVT3 735 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 KIAA1191Q96A73 305 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 SGF29Q96ES7 293 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 NLRP4Q96MN2 994 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 ATP6V0BQ99437 205 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 EIF3CQ99613 913 aaKnown RBP6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 HAUS4Q9H6D7 363 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 GORASP2Q9H8Y8 452 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 UCK1Q9HA47 277 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 SCPEP1Q9HB40 452 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 CBY1Q9Y3M2 126 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 ACACBO00763 2458 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 ZNF292O60281 2723 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 ATP8B3O60423 1300 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 TJP1Q07157 1748 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 CHURC1-FNTBB4DL54 471 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 F6X3S4 739 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 HAT1O14929 419 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 CIDEAO60543 219 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 PEX11AO75192 247 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 TACC1O75410 805 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 PGM3O95394 542 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 HRGP04196 525 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 USP17L7P0C7H9 530 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 PORP16435 677 aaPredicted RBP6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 KCNA5P22460 613 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 CCT6AP40227 531 aaKnown RBP6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 GIPRP48546 466 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 CARD18P57730 90 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 ACTR1AP61163 376 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 ORC1Q13415 861 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 GIT2Q14161 759 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 SQLEQ14534 574 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 EFTUD2Q15029 972 aaKnown RBP eCLIP6.41□□□□□ -1.381e-6■■■■□ 25.2
SMARCE1-208ENST00000474246 INSCQ1MX18 579 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 C2orf76Q3KRA6 126 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 TXNDC11Q6PKC3 985 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 RANBP10Q6VN20 620 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 ZNF704Q6ZNC4 412 aaPredicted RBP6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 CABP7Q86V35 215 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 CDH26Q8IXH8 852 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 C10orf53Q8N6V4 93 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 DNAAF3Q8N9W5 541 aa6.41□□□□□ -1.38
SMARCE1-208ENST00000474246 FAM156AQ8NDB6 213 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms