RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 RWDD3Q9Y3V2 267 aa18.52■□□□□ 0.56
RPL39-202ENST00000468844 PCDHA11Q9Y5I1 949 aa18.52■□□□□ 0.56
RPL39-202ENST00000468844 CDY1Q9Y6F8 540 aa18.52■□□□□ 0.56
RPL39-202ENST00000468844 H7C4K7 107 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 NPR3P17342 541 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 RPL17P18621 184 aaKnown RBP18.51■□□□□ 0.55
RPL39-202ENST00000468844 CACNA2D1P54289 1103 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 PTP4A2Q12974 167 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 ZNF662Q6ZS27 426 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 MCOLN2Q8IZK6 566 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 FBXO22Q8NEZ5 403 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 SLC35F5Q8WV83 523 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 MED10Q9BTT4 135 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 DUSP16Q9BY84 665 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 PBX4Q9BYU1 374 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 ZBP1Q9H171 429 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 KRT82Q9NSB4 513 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 TJP2Q9UDY2 1190 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 INTUQ9ULD6 942 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 CCP110O43303 1012 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 ATMINO43313 823 aaPredicted RBP18.51■□□□□ 0.55
RPL39-202ENST00000468844 DNAJB2P25686 324 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 BMP8BP34820 402 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 KIF5AQ12840 1032 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 ARHGAP29Q52LW3 1261 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 SLC8B1Q6J4K2 584 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 PMF1Q6P1K2 205 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 MMS22LQ6ZRQ5 1243 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 DCP1BQ8IZD4 617 aaKnown RBP18.51■□□□□ 0.55
RPL39-202ENST00000468844 AUTS2Q8WXX7 1259 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 ARHGEF26Q96DR7 871 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 PLVAPQ9BX97 442 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 ALG13Q9NP73 1137 aaKnown RBP18.51■□□□□ 0.55
RPL39-202ENST00000468844 ADAM22Q9P0K1 906 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 SALL4Q9UJQ4 1053 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 BACE2Q9Y5Z0 518 aa18.51■□□□□ 0.55
RPL39-202ENST00000468844 XIRP2A4UGR9 3374 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 COL4A4P53420 1690 aaPredicted RBP18.5■□□□□ 0.55
RPL39-202ENST00000468844 DOCK6Q96HP0 2047 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 C5orf67F2Z3F1 127 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 ADAM12O43184 909 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 URODP06132 367 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 TMEM253P0C7T8 217 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 FAM200BP0CF97 657 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 CPB1P15086 417 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 BDNFP23560 247 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 PPP1R2P3Q6NXS1 205 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 LLGL2Q6P1M3 1020 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 C4orf50Q6ZRC1 276 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 CTNNBL1Q8WYA6 563 aaPredicted RBP18.5■□□□□ 0.55
RPL39-202ENST00000468844 SMARCD1Q96GM5 515 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 PGLYRP2Q96PD5 576 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 CLSTN3Q9BQT9 956 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 OXCT2Q9BYC2 517 aaPredicted RBP18.5■□□□□ 0.55
RPL39-202ENST00000468844 STK39Q9UEW8 545 aa18.5■□□□□ 0.55
RPL39-202ENST00000468844 C5orf42Q9H799 3197 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.49■□□□□ 0.55
RPL39-202ENST00000468844 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.49■□□□□ 0.55
RPL39-202ENST00000468844 WDR27A2RRH5 827 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 KRT86O43790 486 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 AP1G2O75843 785 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 SETSIPP0DME0 302 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 PLA2G4AP47712 749 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 TERF1P54274 439 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 ARPP19P56211 112 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 ROR1Q01973 937 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 C1QBPQ07021 282 aaKnown RBP18.49■□□□□ 0.55
RPL39-202ENST00000468844 GPR17Q13304 367 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 NFE2Q16621 373 aaPredicted RBP18.49■□□□□ 0.55
RPL39-202ENST00000468844 CFAP221Q4G0U5 840 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 ERICH1Q86X53 443 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 TDHQ8IZJ6 230 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 ZMIZ2Q8NF64 920 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 ZNF653Q96CK0 615 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 VCPIP1Q96JH7 1222 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 KCNK16Q96T55 309 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 SMOQ99835 787 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 ST7Q9NRC1 585 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 CHORDC1Q9UHD1 332 aaPredicted RBP18.49■□□□□ 0.55
RPL39-202ENST00000468844 VNN2O95498 520 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 CTSAP10619 480 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 RRM1P23921 792 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 OR1D2P34982 312 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 RGS7P49802 495 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 MAP3K7CLP57077 242 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 TAP1Q03518 808 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 PTPN14Q15678 1187 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 SPATA2LQ8IUW3 424 aaPredicted RBP18.49■□□□□ 0.55
RPL39-202ENST00000468844 TXLNBQ8N3L3 684 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 NOX5Q96PH1 765 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 IRX2Q9BZI1 471 aaPredicted RBP18.49■□□□□ 0.55
RPL39-202ENST00000468844 CSNK1G1Q9HCP0 422 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 ABI2Q9NYB9 513 aaPredicted RBP18.49■□□□□ 0.55
RPL39-202ENST00000468844 GUCA1BQ9UMX6 200 aa18.49■□□□□ 0.55
RPL39-202ENST00000468844 MTMR11A4FU01 709 aa18.48■□□□□ 0.55
RPL39-202ENST00000468844 GOLGA6L9A6NEM1 432 aa18.48■□□□□ 0.55
RPL39-202ENST00000468844 E5RJQ4 531 aa18.48■□□□□ 0.55
RPL39-202ENST00000468844 PIK3R2O00459 728 aa18.48■□□□□ 0.55
RPL39-202ENST00000468844 XPO1O14980 1071 aaKnown RBP18.48■□□□□ 0.55
RPL39-202ENST00000468844 LILRB3O75022 631 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms