RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 CWH43Q9H720 699 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 LRRC19Q9H756 370 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 AAASQ9NRG9 546 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 CNOT8Q9UFF9 292 aaKnown RBP10.48□□□□□ -0.73
PTPRD-207ENST00000463477 EYSQ5T1H1 3165 aa10.48□□□□□ -0.73
PTPRD-207ENST00000463477 ATXN2Q99700 1313 aaKnown RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 CNTNAP2Q9UHC6 1331 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 FSCN2O14926 492 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 SPOPO43791 374 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 PRKCBP05771 671 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 ACO1P21399 889 aaKnown RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 MAN1A1P33908 653 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 GNGT1P63211 74 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 ZNF211Q13398 564 aaPredicted RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 SIX1Q15475 284 aaPredicted RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 TDRD10Q5VZ19 366 aaKnown RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 GLB1LQ6UWU2 654 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 GDPD5Q8WTR4 605 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 LPPQ93052 612 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 MRPL38Q96DV4 380 aaKnown RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 EIF2AQ9BY44 585 aaKnown RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 MRPL9Q9BYD2 267 aaKnown RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 PLEKHA4Q9H4M7 779 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 KANSL3Q9P2N6 904 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 LCMT1Q9UIC8 334 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 IPPQ9Y573 584 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 PCDHB12Q9Y5F1 795 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 PRUNE2Q8WUY3 3088 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 CARNS1A5YM72 827 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 TTLL13PA6NNM8 815 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 MEIS3P2A8K0S8 358 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 INPPL1O15357 1258 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 PYGMP11217 842 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 LAG3P18627 525 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 COILP38432 576 aaPredicted RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 MARCKSL1P49006 195 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 DHX9Q08211 1270 aaKnown RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 SURF1Q15526 300 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 DNAJC21Q5F1R6 531 aaKnown RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 NOMO2Q5JPE7 1267 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 SPOUT1Q5T280 376 aaKnown RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 CCDC137Q6PK04 289 aaKnown RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 SYDE1Q6ZW31 735 aaPredicted RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 SPATS2Q86XZ4 545 aaKnown RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 LRRC43Q8N309 656 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 KLHL23Q8NBE8 558 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 C3orf20Q8ND61 904 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 SPPL3Q8TCT6 385 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 MAGOHBQ96A72 148 aaKnown RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 TRIM51Q9BSJ1 452 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 TMEM109Q9BVC6 243 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 TRIM6Q9C030 488 aaPredicted RBP10.47□□□□□ -0.73
PTPRD-207ENST00000463477 LMAN2LQ9H0V9 348 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 RSAD1Q9HA92 442 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 GRHL1Q9NZI5 618 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 GIT1Q9Y2X7 761 aa10.47□□□□□ -0.73
PTPRD-207ENST00000463477 FNDC1Q4ZHG4 1894 aaPredicted RBP10.46□□□□□ -0.73
PTPRD-207ENST00000463477 SPTBN5Q9NRC6 3674 aaKnown RBP10.46□□□□□ -0.73
PTPRD-207ENST00000463477 MYO7AQ13402 2215 aa10.46□□□□□ -0.73
PTPRD-207ENST00000463477 MYO1FO00160 1098 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 VNN1O95497 513 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 EDN1P05305 212 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 ITGB1P05556 798 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 KRT5P13647 590 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 TNNI1P19237 187 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 FLT3P36888 993 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 MDH1P40925 334 aaKnown RBP10.46□□□□□ -0.74
PTPRD-207ENST00000463477 PIK3CAP42336 1068 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 UBE3AQ05086 875 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 CUL2Q13617 745 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 NAA35Q5VZE5 725 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 KCNT2Q6UVM3 1135 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 ZDHHC24Q6UX98 284 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 MON1BQ7L1V2 547 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 PHF13Q86YI8 300 aaPredicted RBP10.46□□□□□ -0.74
PTPRD-207ENST00000463477 BRSK2Q8IWQ3 736 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 HACE1Q8IYU2 909 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 ZDHHC14Q8IZN3 488 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 SH2D3CQ8N5H7 860 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 UBR7Q8N806 425 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 COLGALT1Q8NBJ5 622 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 UBLCP1Q8WVY7 318 aaPredicted RBP10.46□□□□□ -0.74
PTPRD-207ENST00000463477 ZBTB9Q96C00 473 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 ACO2Q99798 780 aaKnown RBP10.46□□□□□ -0.74
PTPRD-207ENST00000463477 ADPGKQ9BRR6 497 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 MSTO1Q9BUK6 570 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 HAPLN2Q9GZV7 340 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 DPH5Q9H2P9 285 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 PABPC3Q9H361 631 aaKnown RBP10.46□□□□□ -0.74
PTPRD-207ENST00000463477 PDZD7Q9H5P4 517 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 ACP6Q9NPH0 428 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 RBAKQ9NYW8 714 aaPredicted RBP10.46□□□□□ -0.74
PTPRD-207ENST00000463477 MTRF1LQ9UGC7 380 aaKnown RBP10.46□□□□□ -0.74
PTPRD-207ENST00000463477 TNFSF13BQ9Y275 285 aa10.46□□□□□ -0.74
PTPRD-207ENST00000463477 RRP15Q9Y3B9 282 aaKnown RBP10.46□□□□□ -0.74
PTPRD-207ENST00000463477 A0A0C4DFX4 3053 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 TMEM110-MUSTN1A8MSY1 372 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 GRM6O15303 877 aa10.45□□□□□ -0.74
PTPRD-207ENST00000463477 ATMINO43313 823 aaPredicted RBP10.45□□□□□ -0.74
PTPRD-207ENST00000463477 PSTPIP1O43586 416 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms