RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 THAP2Q9H0W7 228 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 TASP1Q9H6P5 420 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 A1CFQ9NQ94 594 aaKnown RBP13.34□□□□□ -0.27
NUP58-206ENST00000463407 KIF17Q9P2E2 1029 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 ALG6Q9Y672 507 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 ATP5HO75947 161 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 ANXA9O76027 345 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 RHOBTB1O94844 696 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 PTGER2P43116 358 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 ZNF410Q86VK4 478 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 BLOC1S5Q8TDH9 187 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 RANBP17Q9H2T7 1088 aaKnown RBP13.34□□□□□ -0.27
NUP58-206ENST00000463407 CHMP2BQ9UQN3 213 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 MROH1Q8NDA8 1641 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 C2orf81A6NN90 581 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 GUCY2CP25092 1073 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 NFE2Q16621 373 aaPredicted RBP13.34□□□□□ -0.27
NUP58-206ENST00000463407 LONRF1Q17RB8 773 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 GRAMD1BQ3KR37 738 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 RFWD2Q8NHY2 731 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 PGLYRP2Q96PD5 576 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 ATXN3LQ9H3M9 355 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 PLA2G4CQ9UP65 541 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 F9P00740 461 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 LGALS2P05162 132 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 CENPCQ03188 943 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 ARL8AQ96BM9 186 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 MRPL40Q9NQ50 206 aaKnown RBP13.34□□□□□ -0.27
NUP58-206ENST00000463407 RBM12Q9NTZ6 932 aaKnown RBP13.34□□□□□ -0.27
NUP58-206ENST00000463407 MZF1P28698 734 aaPredicted RBP13.34□□□□□ -0.27
NUP58-206ENST00000463407 TKTL1P51854 596 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 VSNL1P62760 191 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 LINC00523Q86TU6 105 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 NLRP14Q86W24 1093 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 LRRC37BQ96QE4 947 aa13.34□□□□□ -0.27
NUP58-206ENST00000463407 CDK5RAP1Q96SZ6 601 aaKnown RBP13.34□□□□□ -0.27
NUP58-206ENST00000463407 PRMT1Q99873 361 aaKnown RBP13.34□□□□□ -0.27
NUP58-206ENST00000463407 FOXN3O00409 490 aaPredicted RBP13.33□□□□□ -0.27
NUP58-206ENST00000463407 MEFVO15553 781 aaPredicted RBP13.33□□□□□ -0.27
NUP58-206ENST00000463407 PYGBP11216 843 aa13.33□□□□□ -0.27
NUP58-206ENST00000463407 TM4SF1P30408 202 aa13.33□□□□□ -0.27
NUP58-206ENST00000463407 TRIM65Q6PJ69 517 aa13.33□□□□□ -0.27
NUP58-206ENST00000463407 GPR142Q7Z601 462 aa13.33□□□□□ -0.27
NUP58-206ENST00000463407 RIN2Q8WYP3 895 aaPredicted RBP13.33□□□□□ -0.27
NUP58-206ENST00000463407 SLC4A9Q96Q91 983 aa13.33□□□□□ -0.27
NUP58-206ENST00000463407 SYT15Q9BQS2 421 aa13.33□□□□□ -0.27
NUP58-206ENST00000463407 HEATR9A2RTY3 570 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 FAM86B1E9PN63 330 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 FAM86B2P0C5J1 330 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 GEMP55040 296 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 ZNF200P98182 395 aaPredicted RBP13.33□□□□□ -0.28
NUP58-206ENST00000463407 PTK6Q13882 451 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 NIPA1Q7RTP0 329 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 FAM163AQ96GL9 167 aaPredicted RBP13.33□□□□□ -0.28
NUP58-206ENST00000463407 GOLPH3Q9H4A6 298 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 ADAM21Q9UKJ8 722 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 PCDHAC2Q9Y5I4 1007 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 SLC15A5A6NIM6 579 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 TMEM88BA6NKF7 163 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 PSMC6P62333 389 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 NAA30Q147X3 362 aaPredicted RBP13.33□□□□□ -0.28
NUP58-206ENST00000463407 HSP90AA5PQ58FG0 334 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 C1orf146Q5VVC0 180 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 CXCL17Q6UXB2 119 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 RRM2BQ7LG56 351 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 C11orf96Q7Z7L8 435 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 TMC2Q8TDI7 906 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 MTBPQ96DY7 904 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 SEMA6BQ9H3T3 888 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 XYLBO75191 536 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 PGK1P00558 417 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 RBP3P10745 1247 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 BST2Q10589 180 aaKnown RBP13.33□□□□□ -0.28
NUP58-206ENST00000463407 TRADDQ15628 312 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.28
NUP58-206ENST00000463407 CCDC33Q8N5R6 958 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 FAM172AQ8WUF8 416 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 ADAM2Q99965 735 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 NEUROG2Q9H2A3 272 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 SELENONQ9NZV5 590 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 LMNAP02545 664 aaKnown RBP13.33□□□□□ -0.28
NUP58-206ENST00000463407 ESRRGP62508 458 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 C2CD6Q53TS8 623 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 TIGD7Q6NT04 549 aaPredicted RBP13.33□□□□□ -0.28
NUP58-206ENST00000463407 COG1Q8WTW3 980 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 CYP3A43Q9HB55 503 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 CISHQ9NSE2 258 aa13.33□□□□□ -0.28
NUP58-206ENST00000463407 ACAT1P24752 427 aaKnown RBP13.32□□□□□ -0.28
NUP58-206ENST00000463407 DENND5BQ6ZUT9 1274 aa13.32□□□□□ -0.28
NUP58-206ENST00000463407 JAMLQ86YT9 394 aa13.32□□□□□ -0.28
NUP58-206ENST00000463407 PPP1R13LQ8WUF5 828 aa13.32□□□□□ -0.28
NUP58-206ENST00000463407 SLC5A5Q92911 643 aa13.32□□□□□ -0.28
NUP58-206ENST00000463407 ALDH1A2O94788 518 aa13.32□□□□□ -0.28
NUP58-206ENST00000463407 PBLDP30039 288 aaPredicted RBP13.32□□□□□ -0.28
NUP58-206ENST00000463407 SERPINB9P50453 376 aa13.32□□□□□ -0.28
NUP58-206ENST00000463407 CELF3Q5SZQ8 465 aaKnown RBP13.32□□□□□ -0.28
NUP58-206ENST00000463407 C4orf22Q6V702 233 aa13.32□□□□□ -0.28
NUP58-206ENST00000463407 ADGRA2Q96PE1 1338 aa13.32□□□□□ -0.28
NUP58-206ENST00000463407 TMEM150BA6NC51 233 aa13.32□□□□□ -0.28
NUP58-206ENST00000463407 RAD51CO43502 376 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms