RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 LAMTOR5O43504 91 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 TACC1O75410 805 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 NOL4O94818 638 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 ABL1P00519 1130 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 HLA-DRAP01903 254 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 C4BPAP04003 597 aaKnown RBP10.32□□□□□ -0.76
USP54-207ENST00000451492 CKMP06732 381 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 PTPN1P18031 435 aaKnown RBP10.32□□□□□ -0.76
USP54-207ENST00000451492 ATICP31939 592 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 GCLMP48507 274 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 USP46P62068 366 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 FAM160A1Q05DH4 1040 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 KCNB1Q14721 858 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 MAPRE1Q15691 268 aaKnown RBP10.32□□□□□ -0.76
USP54-207ENST00000451492 DCAF17Q5H9S7 520 aaPredicted RBP10.32□□□□□ -0.76
USP54-207ENST00000451492 LIMS2Q7Z4I7 341 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 C1orf210Q8IVY1 113 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 GUF1Q8N442 669 aaKnown RBP10.32□□□□□ -0.76
USP54-207ENST00000451492 B3GALNT2Q8NCR0 500 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 RIN3Q8TB24 985 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 MYCBPAPQ8TBZ2 947 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 JAKMIP2Q96AA8 810 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 E2F7Q96AV8 911 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 FUBP3Q96I24 572 aaKnown RBP eCLIP10.32□□□□□ -0.76
USP54-207ENST00000451492 SLC22A12Q96S37 553 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 CYP2S1Q96SQ9 504 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 DDX23Q9BUQ8 820 aaKnown RBP10.32□□□□□ -0.76
USP54-207ENST00000451492 FAM49BQ9NUQ9 324 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 UXTQ9UBK9 157 aaPredicted RBP10.32□□□□□ -0.76
USP54-207ENST00000451492 HMGXB4Q9UGU5 601 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 TRAF3IP3Q9Y228 551 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 FRYLO94915 3013 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 ATG2BQ96BY7 2078 aa10.32□□□□□ -0.76
USP54-207ENST00000451492 TRIM49BA6NDI0 452 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 SHISA7A6NL88 538 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 ARNTLO00327 626 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 TRIM66O15016 1216 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 STAU1O95793 577 aaKnown RBP10.31□□□□□ -0.76
USP54-207ENST00000451492 P4HA1P13674 534 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 CCDC130P13994 396 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 CD58P19256 250 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 PRCPP42785 496 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 MAGEA11P43364 429 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 AP3M2P53677 418 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 CSTF1Q05048 431 aaKnown RBP10.31□□□□□ -0.76
USP54-207ENST00000451492 PPP3CAQ08209 521 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 FCHO2Q0JRZ9 810 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 ADAM9Q13443 819 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 PON2Q15165 354 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 ZACNQ401N2 412 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 ARHGAP29Q52LW3 1261 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 C1orf220Q5T0J3 134 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 TCERG1LQ5VWI1 586 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 TXNDC11Q6PKC3 985 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 TSSK4Q6SA08 328 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 DENND5BQ6ZUT9 1274 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 SV2AQ7L0J3 742 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 ASCL5Q7RTU5 278 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 ACOT1Q86TX2 421 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 FAM35AQ86V20 835 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 CELF5Q8N6W0 485 aaKnown RBP10.31□□□□□ -0.76
USP54-207ENST00000451492 ARL14EPQ8N8R7 260 aaPredicted RBP10.31□□□□□ -0.76
USP54-207ENST00000451492 TMC2Q8TDI7 906 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 USP13Q92995 863 aaPredicted RBP10.31□□□□□ -0.76
USP54-207ENST00000451492 SMARCE1Q969G3 411 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 TRMT2BQ96GJ1 504 aaKnown RBP10.31□□□□□ -0.76
USP54-207ENST00000451492 B3GNT5Q9BYG0 378 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 IMPG2Q9BZV3 1241 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 EBF3Q9H4W6 596 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 RBM12Q9NTZ6 932 aaKnown RBP10.31□□□□□ -0.76
USP54-207ENST00000451492 TDP1Q9NUW8 608 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 TMEM30AQ9NV96 361 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 RMND1Q9NWS8 449 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 MRPS17Q9Y2R5 130 aaKnown RBP10.31□□□□□ -0.76
USP54-207ENST00000451492 ATP8B3O60423 1300 aa10.31□□□□□ -0.76
USP54-207ENST00000451492 TRAV19A0A0A6YYK7 116 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 SPECC1L-ADORA2AF8WAN1 911 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 MAN2B1O00754 1011 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 SCAMP3O14828 347 aaKnown RBP10.3□□□□□ -0.76
USP54-207ENST00000451492 NCAM2O15394 837 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 GADD45BO75293 160 aaPredicted RBP10.3□□□□□ -0.76
USP54-207ENST00000451492 SMC2O95347 1197 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 SP9P0CG40 484 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 EPB41P11171 864 aaKnown RBP10.3□□□□□ -0.76
USP54-207ENST00000451492 ARSAP15289 507 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 DDX6P26196 483 aaKnown RBP eCLIP10.3□□□□□ -0.76
USP54-207ENST00000451492 RPL13P26373 211 aaKnown RBP10.3□□□□□ -0.76
USP54-207ENST00000451492 ADORA2BP29275 332 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 PSMC2P35998 433 aaKnown RBP10.3□□□□□ -0.76
USP54-207ENST00000451492 NBL1P41271 181 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 NDST1P52848 882 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 NOP14P78316 857 aaKnown RBP10.3□□□□□ -0.76
USP54-207ENST00000451492 CLDN10P78369 228 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 SGSM1Q2NKQ1 1148 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 ZNF658Q5TYW1 1059 aaPredicted RBP10.3□□□□□ -0.76
USP54-207ENST00000451492 CC2D1AQ6P1N0 951 aaPredicted RBP10.3□□□□□ -0.76
USP54-207ENST00000451492 VSTM1Q6UX27 236 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 INTS8Q75QN2 995 aaKnown RBP10.3□□□□□ -0.76
USP54-207ENST00000451492 ENGASEQ8NFI3 743 aa10.3□□□□□ -0.76
USP54-207ENST00000451492 TAS1R2Q8TE23 839 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms