RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 CNPP09543 421 aaKnown RBP15.39■□□□□ 0.05
SGCE-202ENST00000415788 PDGFRBP09619 1106 aa15.39■□□□□ 0.05
SGCE-202ENST00000415788 CPB1P15086 417 aa15.39■□□□□ 0.05
SGCE-202ENST00000415788 OR1D2P34982 312 aa15.39■□□□□ 0.05
SGCE-202ENST00000415788 RAB33AQ14088 237 aa15.39■□□□□ 0.05
SGCE-202ENST00000415788 NFE2Q16621 373 aaPredicted RBP15.39■□□□□ 0.05
SGCE-202ENST00000415788 B3GALNT2Q8NCR0 500 aa15.39■□□□□ 0.05
SGCE-202ENST00000415788 CPLX3Q8WVH0 158 aa15.39■□□□□ 0.05
SGCE-202ENST00000415788 GAS2L1Q99501 681 aaPredicted RBP15.39■□□□□ 0.05
SGCE-202ENST00000415788 CDCA3Q99618 268 aaPredicted RBP15.39■□□□□ 0.05
SGCE-202ENST00000415788 TTYH3Q9C0H2 523 aa15.39■□□□□ 0.05
SGCE-202ENST00000415788 NLRC4Q9NPP4 1024 aa15.39■□□□□ 0.05
SGCE-202ENST00000415788 ABHD10Q9NUJ1 306 aa15.39■□□□□ 0.05
SGCE-202ENST00000415788 KIAA1257Q9ULG3 409 aa15.39■□□□□ 0.05
SGCE-202ENST00000415788 MAFFQ9ULX9 164 aa15.39■□□□□ 0.05
SGCE-202ENST00000415788 TSC2P49815 1807 aa15.38■□□□□ 0.05
SGCE-202ENST00000415788 EIF3CLB5ME19 914 aaKnown RBP15.38■□□□□ 0.05
SGCE-202ENST00000415788 KRT5P13647 590 aa15.38■□□□□ 0.05
SGCE-202ENST00000415788 PTPN1P18031 435 aaKnown RBP15.38■□□□□ 0.05
SGCE-202ENST00000415788 ACAT1P24752 427 aaKnown RBP15.38■□□□□ 0.05
SGCE-202ENST00000415788 STAT1P42224 750 aa15.38■□□□□ 0.05
SGCE-202ENST00000415788 ARHGAP25P42331 645 aa15.38■□□□□ 0.05
SGCE-202ENST00000415788 RAD23BP54727 409 aa15.38■□□□□ 0.05
SGCE-202ENST00000415788 JAM2P57087 298 aa15.38■□□□□ 0.05
SGCE-202ENST00000415788 ROR1Q01973 937 aa15.38■□□□□ 0.05
SGCE-202ENST00000415788 GPR17Q13304 367 aa15.38■□□□□ 0.05
SGCE-202ENST00000415788 TPGS2Q68CL5 300 aa15.38■□□□□ 0.05
SGCE-202ENST00000415788 FAM171BQ6P995 826 aa15.38■□□□□ 0.05
SGCE-202ENST00000415788 LRRC31Q6UY01 552 aa15.38■□□□□ 0.05
SGCE-202ENST00000415788 RBBP8NLQ8NC74 664 aaPredicted RBP15.38■□□□□ 0.05
SGCE-202ENST00000415788 C2orf15Q8WU43 125 aaKnown RBP15.38■□□□□ 0.05
SGCE-202ENST00000415788 EIF3CQ99613 913 aaKnown RBP15.38■□□□□ 0.05
SGCE-202ENST00000415788 NUCKS1Q9H1E3 243 aaKnown RBP15.38■□□□□ 0.05
SGCE-202ENST00000415788 NSUN3Q9H649 340 aaKnown RBP15.38■□□□□ 0.05
SGCE-202ENST00000415788 HMGXB4Q9UGU5 601 aa15.38■□□□□ 0.05
SGCE-202ENST00000415788 AJAP1Q9UKB5 411 aaPredicted RBP15.38■□□□□ 0.05
SGCE-202ENST00000415788 NME7Q9Y5B8 376 aa15.38■□□□□ 0.05
SGCE-202ENST00000415788 VWA8A3KMH1 1905 aa15.38■□□□□ 0.05
SGCE-202ENST00000415788 CSPG5O95196 566 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 RPL17P18621 184 aaKnown RBP15.37■□□□□ 0.05
SGCE-202ENST00000415788 KLRC2P26717 231 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 FXR1P51114 621 aaKnown RBP eCLIP15.37■□□□□ 0.05
SGCE-202ENST00000415788 ZNF132P52740 706 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 BPIFB4P59827 614 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 CKAP4Q07065 602 aaKnown RBP15.37■□□□□ 0.05
SGCE-202ENST00000415788 ZNF394Q53GI3 561 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 ICE2Q659A1 982 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 RSPO2Q6UXX9 243 aaPredicted RBP15.37■□□□□ 0.05
SGCE-202ENST00000415788 C4orf50Q6ZRC1 276 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 ZNF662Q6ZS27 426 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 ACOT1Q86TX2 421 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 FAM71AQ8IYT1 594 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 ZNF461Q8TAF7 563 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 MYCBPAPQ8TBZ2 947 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 TWNKQ96RR1 684 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 PKMYT1Q99640 499 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 GPR88Q9GZN0 384 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 ELOVL4Q9GZR5 314 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 HAUS4Q9H6D7 363 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 FAM204AQ9H8W3 233 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 FOXN3O00409 490 aaPredicted RBP15.37■□□□□ 0.05
SGCE-202ENST00000415788 HCRTO43612 131 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 CPP00450 1065 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 CCDC172P0C7W6 258 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 SOX5P35711 763 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 USP8P40818 1118 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 PSMC1P62191 440 aaKnown RBP15.37■□□□□ 0.05
SGCE-202ENST00000415788 SLC39A12Q504Y0 691 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 SLC4A11Q8NBS3 891 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 ACRBPQ8NEB7 543 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 HEXIM2Q96MH2 286 aaKnown RBP15.37■□□□□ 0.05
SGCE-202ENST00000415788 DPEP3Q9H4B8 488 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 CRTAC1Q9NQ79 661 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 HSFX1Q9UBD0 423 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 AFF4Q9UHB7 1163 aaKnown RBP15.37■□□□□ 0.05
SGCE-202ENST00000415788 DPP7Q9UHL4 492 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 CAPN11Q9UMQ6 739 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 LUC7L2Q9Y383 392 aaKnown RBP15.37■□□□□ 0.05
SGCE-202ENST00000415788 PCDHGC5Q9Y5F6 944 aa15.37■□□□□ 0.05
SGCE-202ENST00000415788 COL4A4P53420 1690 aaPredicted RBP15.36■□□□□ 0.05
SGCE-202ENST00000415788 WDR27A2RRH5 827 aa15.36■□□□□ 0.05
SGCE-202ENST00000415788 ADAM12O43184 909 aa15.36■□□□□ 0.05
SGCE-202ENST00000415788 ABLIM3O94929 683 aa15.36■□□□□ 0.05
SGCE-202ENST00000415788 GLUD1P00367 558 aa15.36■□□□□ 0.05
SGCE-202ENST00000415788 ARPP19P56211 112 aa15.36■□□□□ 0.05
SGCE-202ENST00000415788 ZBED6P86452 979 aa15.36■□□□□ 0.05
SGCE-202ENST00000415788 PTK2Q05397 1052 aa15.36■□□□□ 0.05
SGCE-202ENST00000415788 STILQ15468 1287 aa15.36■□□□□ 0.05
SGCE-202ENST00000415788 SPPL2BQ8TCT7 592 aa15.36■□□□□ 0.05
SGCE-202ENST00000415788 BAP1Q92560 729 aa15.36■□□□□ 0.05
SGCE-202ENST00000415788 FUBP3Q96I24 572 aaKnown RBP eCLIP15.36■□□□□ 0.05
SGCE-202ENST00000415788 TMEM209Q96SK2 561 aa15.36■□□□□ 0.05
SGCE-202ENST00000415788 TLE6Q9H808 572 aa15.36■□□□□ 0.05
SGCE-202ENST00000415788 GTF3C4Q9UKN8 822 aa15.36■□□□□ 0.05
SGCE-202ENST00000415788 ATP8B3O60423 1300 aa15.36■□□□□ 0.05
SGCE-202ENST00000415788 A0A0U1RQJ8 604 aa15.35■□□□□ 0.05
SGCE-202ENST00000415788 MYBPHLA2RUH7 354 aa15.35■□□□□ 0.05
SGCE-202ENST00000415788 RNF40O75150 1001 aa15.35■□□□□ 0.05
SGCE-202ENST00000415788 OR4Q2P0C623 313 aa15.35■□□□□ 0.05
SGCE-202ENST00000415788 VDRP11473 427 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms