RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SATB1Q01826 763 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 ANKRD16Q6P6B7 361 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 NPNTQ6UXI9 565 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 WDR53Q7Z5U6 358 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 RAVER1Q8IY67 606 aaKnown RBP4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 TCEAL8Q8IYN2 117 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 CELF5Q8N6W0 485 aaKnown RBP4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 ZBTB34Q8NCN2 500 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 MESP1Q9BRJ9 268 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 TRIM54Q9BYV2 358 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 UBA5Q9GZZ9 404 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 SERHLQ9NQF3 203 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 C1orf112Q9NSG2 853 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 ST3GAL5Q9UNP4 418 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 SSX2IPQ9Y2D8 614 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 EID1Q9Y6B2 187 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 A0A087WWL8 130 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 BTN3A1O00481 513 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 ERC2O15083 957 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 RBMXL2O75526 392 aaKnown RBP4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 S100BP04271 92 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 CCT8P50990 548 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 LILRA4P59901 499 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 PPP2R5AQ15172 486 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 LMBRD2Q68DH5 695 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 ZNF783Q6ZMS7 281 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 MAEAQ7L5Y9 396 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 PTF1AQ7RTS3 328 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 OVCH2Q7RTZ1 564 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 GAS2L3Q86XJ1 694 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 RASAL3Q86YV0 1011 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 KIAA0319LQ8IZA0 1049 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 DNAJC5GQ8N7S2 189 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 OR6B3Q8NGW1 331 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 ANKS1AQ92625 1134 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 SUCLG2Q96I99 432 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 P2RX7Q99572 595 aaKnown RBP4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 STAP2Q9UGK3 403 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 ADAM21Q9UKJ8 722 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 NDRG4Q9ULP0 352 aaKnown RBP4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 L1RE1Q9UN81 338 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 WNT6Q9Y6F9 365 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 MAPKBP1O60336 1514 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 PCSK5Q92824 1860 aa4.49□□□□□ -1.69
HMGB3P23-201ENST00000414981 AOX1Q06278 1338 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 FHAD1B1AJZ9 1412 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 KIF27Q86VH2 1401 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 CREB3O43889 395 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 TBC1D4O60343 1298 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 JUPP14923 745 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 NPR1P16066 1061 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 NDUFB7P17568 137 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 PAX3P23760 479 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 DGKEP52429 567 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 CTBP1Q13363 440 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 OS9Q13438 667 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 AARS2Q5JTZ9 985 aaKnown RBP4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 ARHGAP40Q5TG30 622 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 ZNF788Q6ZQV5 615 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 SLC15A4Q8N697 577 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 MAGEB6Q8N7X4 407 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 NT5C1BQ96P26 610 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 MAF1Q9H063 256 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 ZMAT3Q9HA38 289 aaKnown RBP4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 ATP6V0A4Q9HBG4 840 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 ZSCAN32Q9NX65 697 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 TCEAL9Q9UHQ7 104 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 NOB1Q9ULX3 412 aaKnown RBP4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 PAXBP1Q9Y5B6 917 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 RAB3GAP2Q9H2M9 1393 aa4.48□□□□□ -1.69
HMGB3P23-201ENST00000414981 CAPN8A6NHC0 703 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 FRS3O43559 492 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 PDHA1P08559 390 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 KITP10721 976 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 ZNF37AP17032 561 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 EN2P19622 333 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 PCSK6P29122 969 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 LRRC41Q15345 812 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 TBC1D25Q3MII6 688 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 MGAT5BQ3V5L5 792 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 KIAA1614Q5VZ46 1190 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 FCRLBQ6BAA4 426 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 CEP85Q6P2H3 762 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 PARS2Q7L3T8 475 aaKnown RBP4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 MAVSQ7Z434 540 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 IL31RAQ8NI17 732 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 RP9Q8TA86 221 aaKnown RBP4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 HASPINQ8TF76 798 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 TBC1D5Q92609 795 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 B3GNT5Q9BYG0 378 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 ZNF518BQ9C0D4 1074 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 SMURF2Q9HAU4 748 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 XPNPEP3Q9NQH7 507 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 DLL3Q9NYJ7 618 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 CHPF2Q9P2E5 772 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 SERTAD3Q9UJW9 196 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 PNMA2Q9UL42 364 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 PADI4Q9UM07 663 aa4.47□□□□□ -1.69
HMGB3P23-201ENST00000414981 ATAD2BQ9ULI0 1458 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms