RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 TCRBV7S2A1N4TA0A589 114 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 GOLGA6L10A6NI86 522 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 A8MXQ7 604 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 KIAA0754O94854 1291 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 ERBB2P04626 1255 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 MYZAPP0CAP1 466 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 GHRP10912 638 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 RFC1P35251 1148 aaPredicted RBP20.46■□□□□ 0.87
SSU72-204ENST00000378726 FNTAP49354 379 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 LILRA4P59901 499 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 OGDHQ02218 1023 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 ZNF844Q08AG5 666 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 STILQ15468 1287 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 XYLT1Q86Y38 959 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 PRELID2Q8N945 189 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 PPP1R10Q96QC0 940 aaKnown RBP20.46■□□□□ 0.87
SSU72-204ENST00000378726 GAD1Q99259 594 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 MTUS1Q9ULD2 1270 aa20.46■□□□□ 0.87
SSU72-204ENST00000378726 F8VP50 259 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 TTI1O43156 1089 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 PSTPIP1O43586 416 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 GNL1P36915 607 aaPredicted RBP20.45■□□□□ 0.86
SSU72-204ENST00000378726 GABRB2P47870 512 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 ZNF252P-AS1Q0IIN9 211 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 SV2CQ496J9 727 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 SPATS2Q86XZ4 545 aaKnown RBP20.45■□□□□ 0.86
SSU72-204ENST00000378726 GSTCDQ8NEC7 633 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 LPPQ93052 612 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 LRRC45Q96CN5 670 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 GLT1D1Q96MS3 346 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 E7EVH7 732 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 DAPK3O43293 454 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 INHAP05111 366 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 PDGFRBP09619 1106 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 LRPAP1P30533 357 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 MLH1P40692 756 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 PIGHQ14442 188 aaPredicted RBP20.45■□□□□ 0.86
SSU72-204ENST00000378726 APPL2Q8NEU8 664 aa20.45■□□□□ 0.86
SSU72-204ENST00000378726 MAGOHBQ96A72 148 aaKnown RBP20.45■□□□□ 0.86
SSU72-204ENST00000378726 HMX1Q9NP08 348 aaPredicted RBP20.45■□□□□ 0.86
SSU72-204ENST00000378726 FSCN2O14926 492 aa20.44■□□□□ 0.86
SSU72-204ENST00000378726 RARAP10276 462 aa20.44■□□□□ 0.86
SSU72-204ENST00000378726 AFF1P51825 1210 aaKnown RBP20.44■□□□□ 0.86
SSU72-204ENST00000378726 GOLGA7BQ2TAP0 167 aa20.44■□□□□ 0.86
SSU72-204ENST00000378726 ZNF618Q5T7W0 954 aa20.44■□□□□ 0.86
SSU72-204ENST00000378726 LHX8Q68G74 356 aa20.44■□□□□ 0.86
SSU72-204ENST00000378726 CNPY4Q8N129 248 aa20.44■□□□□ 0.86
SSU72-204ENST00000378726 KBTBD7Q8WVZ9 684 aa20.44■□□□□ 0.86
SSU72-204ENST00000378726 PPANQ9NQ55 473 aaKnown RBP20.44■□□□□ 0.86
SSU72-204ENST00000378726 FAM49BQ9NUQ9 324 aa20.44■□□□□ 0.86
SSU72-204ENST00000378726 MIOSQ9NXC5 875 aa20.44■□□□□ 0.86
SSU72-204ENST00000378726 MOXD2PA6NHM9 499 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 HCRTO43612 131 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 HUS1O60921 280 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 FKTNO75072 461 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 PHF2O75151 1096 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 PFKMP08237 780 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 FGFR1P11362 822 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 LMO2P25791 158 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 HTRA3P83110 453 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 LPIN1Q14693 890 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 AGMOQ6ZNB7 445 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 JOSD2Q8TAC2 188 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 ZNF296Q8WUU4 475 aaPredicted RBP20.43■□□□□ 0.86
SSU72-204ENST00000378726 UBLCP1Q8WVY7 318 aaPredicted RBP20.43■□□□□ 0.86
SSU72-204ENST00000378726 LPIN3Q9BQK8 851 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 SNX25Q9H3E2 840 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 DPEP3Q9H4B8 488 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 BCCIPQ9P287 314 aaKnown RBP eCLIP20.43■□□□□ 0.86
SSU72-204ENST00000378726 CEP350Q5VT06 3117 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 FAM107AO95990 144 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 THP07101 528 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 CHRNA3P32297 505 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 GJC1P36383 396 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 GSCP56915 257 aaPredicted RBP20.43■□□□□ 0.86
SSU72-204ENST00000378726 DR1Q01658 176 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 TRIM71Q2Q1W2 868 aaKnown RBP20.43■□□□□ 0.86
SSU72-204ENST00000378726 MICALCLQ6ZW33 695 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 MRPL10Q7Z7H8 261 aaKnown RBP20.43■□□□□ 0.86
SSU72-204ENST00000378726 KATNAL2Q8IYT4 538 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 MCRS1Q96EZ8 462 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 TSPYL2Q9H2G4 693 aaPredicted RBP20.43■□□□□ 0.86
SSU72-204ENST00000378726 SLC38A7Q9NVC3 462 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 GIT1Q9Y2X7 761 aa20.43■□□□□ 0.86
SSU72-204ENST00000378726 PIK3R2O00459 728 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 MGEA5O60502 916 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 FSBPO95073 299 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 TCF4P15884 667 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 ARHGEF6Q15052 776 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 SIX1Q15475 284 aaPredicted RBP20.42■□□□□ 0.86
SSU72-204ENST00000378726 ATP13A4Q4VNC1 1196 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 FAM26DQ5JW98 314 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 LIMS2Q7Z4I7 341 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 TTC30AQ86WT1 665 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 CCDC50Q8IVM0 306 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 CRYBG2Q8N1P7 616 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 TSEN34Q9BSV6 310 aaKnown RBP20.42■□□□□ 0.86
SSU72-204ENST00000378726 METTL5Q9NRN9 209 aaKnown RBP20.42■□□□□ 0.86
SSU72-204ENST00000378726 HESX1Q9UBX0 185 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 UTP11Q9Y3A2 253 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms