RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 A0A1W2PPM1 405 aa12.52□□□□□ -0.41
TP53-220ENST00000610623 BAG2O95816 211 aa12.52□□□□□ -0.41
TP53-220ENST00000610623 FOSP01100 380 aaPredicted RBP12.52□□□□□ -0.41
TP53-220ENST00000610623 GH2P01242 217 aa12.52□□□□□ -0.41
TP53-220ENST00000610623 DLDP09622 509 aaKnown RBP12.52□□□□□ -0.41
TP53-220ENST00000610623 ADRA1DP25100 572 aa12.52□□□□□ -0.41
TP53-220ENST00000610623 CYLC2Q14093 348 aaPredicted RBP12.52□□□□□ -0.41
TP53-220ENST00000610623 CCDC142Q17RM4 750 aa12.52□□□□□ -0.41
TP53-220ENST00000610623 ZNF746Q6NUN9 644 aaPredicted RBP12.52□□□□□ -0.41
TP53-220ENST00000610623 FBXO11Q86XK2 927 aa12.52□□□□□ -0.41
TP53-220ENST00000610623 OGFOD1Q8N543 542 aa12.52□□□□□ -0.41
TP53-220ENST00000610623 NMD3Q96D46 503 aaKnown RBP12.52□□□□□ -0.41
TP53-220ENST00000610623 TTC1Q99614 292 aa12.52□□□□□ -0.41
TP53-220ENST00000610623 ANO3Q9BYT9 981 aa12.52□□□□□ -0.41
TP53-220ENST00000610623 ZNF70Q9UC06 446 aaPredicted RBP12.52□□□□□ -0.41
TP53-220ENST00000610623 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.52□□□□□ -0.41
TP53-220ENST00000610623 UBE4BO95155 1302 aa12.52□□□□□ -0.41
TP53-220ENST00000610623 RSPH10B2B2RC85 870 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 C3orf80F5H4A9 247 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 FCHO1O14526 889 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 STRNO43815 780 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 RSPH10BP0C881 870 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 SPATA31C1P0DKV0 1188 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 KLRC2P26717 231 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 STAT3P40763 770 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 GRIA2P42262 883 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 GEMIN4P57678 1058 aaKnown RBP12.51□□□□□ -0.41
TP53-220ENST00000610623 SPIRE1Q08AE8 756 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 KYAT3Q6YP21 454 aaKnown RBP12.51□□□□□ -0.41
TP53-220ENST00000610623 SATL1Q86VE3 508 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 SLC5A5Q92911 643 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 CLMNQ96JQ2 1002 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 ARHGEF4Q9NR80 690 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 CLIC5Q9NZA1 410 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 P4HA2O15460 535 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 TRIM49P0CI25 452 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 TRIM49CP0CI26 452 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 ADSSP30520 456 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 BFSP1Q12934 665 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 KLF1Q13351 362 aaPredicted RBP12.51□□□□□ -0.41
TP53-220ENST00000610623 LLGL1Q15334 1064 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 SHROOM1Q2M3G4 852 aaPredicted RBP12.51□□□□□ -0.41
TP53-220ENST00000610623 HSP90AA5PQ58FG0 334 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 ZNF554Q86TJ5 538 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 CHSY1Q86X52 802 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 ULK2Q8IYT8 1036 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 ZBTB8BQ8NAP8 495 aaPredicted RBP12.51□□□□□ -0.41
TP53-220ENST00000610623 AGBL3Q8NEM8 1001 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 EPS8L1Q8TE68 723 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 ZNF526Q8TF50 670 aaPredicted RBP12.51□□□□□ -0.41
TP53-220ENST00000610623 FAM172AQ8WUF8 416 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 NOCTQ9UK39 431 aaKnown RBP12.51□□□□□ -0.41
TP53-220ENST00000610623 PLA2G4CQ9UP65 541 aa12.51□□□□□ -0.41
TP53-220ENST00000610623 CAPN14A8MX76 684 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 NDC80O14777 642 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 TBX3O15119 743 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 ALOX15BO15296 676 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 ZNF862O60290 1169 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 RPL5P46777 297 aaKnown RBP12.5□□□□□ -0.41
TP53-220ENST00000610623 CLCN2P51788 898 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 CHN2P52757 468 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 ADARP55265 1226 aaKnown RBP12.5□□□□□ -0.41
TP53-220ENST00000610623 PTP4A2Q12974 167 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 IKQ13123 557 aaPredicted RBP12.5□□□□□ -0.41
TP53-220ENST00000610623 PRKD1Q15139 912 aaPredicted RBP12.5□□□□□ -0.41
TP53-220ENST00000610623 P3H1Q32P28 736 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 EFHC2Q5JST6 749 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 C1orf146Q5VVC0 180 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 OLFML2BQ68BL8 750 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 RFX8Q6ZV50 586 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 STXBP4Q6ZWJ1 553 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 TCP10LQ8TDR4 215 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 PRR11Q96HE9 360 aaPredicted RBP12.5□□□□□ -0.41
TP53-220ENST00000610623 C1orf21Q9H246 121 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 VPS37BQ9H9H4 285 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 WDR37Q9Y2I8 494 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 WDR91A4D1P6 747 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 TMEM221A6NGB7 291 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 TCP10L2B9ZVM9 353 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 H3BRJ5 948 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 MEIS1O00470 390 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 DNALI1O14645 258 aaPredicted RBP12.5□□□□□ -0.41
TP53-220ENST00000610623 ATP2A1O14983 1001 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 DPEP1P16444 411 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 VCLP18206 1134 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 MAGEA10P43363 369 aaPredicted RBP12.5□□□□□ -0.41
TP53-220ENST00000610623 PRSS12P56730 875 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 RAPH1Q70E73 1250 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 DHDDSQ86SQ9 333 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 NIM1KQ8IY84 436 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 RBM15BQ8NDT2 890 aaKnown RBP12.5□□□□□ -0.41
TP53-220ENST00000610623 ETNPPLQ8TBG4 499 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 MTBPQ96DY7 904 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 PRICKLE1Q96MT3 831 aaPredicted RBP12.5□□□□□ -0.41
TP53-220ENST00000610623 KLHL4Q9C0H6 718 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 PCDH18Q9HCL0 1135 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 SLC7A8Q9UHI5 535 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 PPM1HQ9ULR3 514 aa12.5□□□□□ -0.41
TP53-220ENST00000610623 PAIP2BQ9ULR5 123 aaKnown RBP12.5□□□□□ -0.41
TP53-220ENST00000610623 ZNRF3Q9ULT6 936 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms