RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	DLGAP2	Q9P1A6	1054 aa		13.46	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.46	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.46	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.46	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	MYBPHL	A2RUH7	354 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	HEPACAM2	A8MVW5	462 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	NRG2	O14511	850 aa	Predicted RBP	13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	DPYSL4	O14531	572 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	SMC2	O95347	1197 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	F11	P03951	625 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	C4BPA	P04003	597 aa	Known RBP	13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	GJA1	P17302	382 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PFKL	P17858	780 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	NR2F2	P24468	414 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ACAT1	P24752	427 aa	Known RBP	13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	CYP2F1	P24903	491 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	VIPR2	P41587	438 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	RPS9	P46781	194 aa	Known RBP	13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PDE6C	P51160	858 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	NLRP12	P59046	1061 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	MYL6	P60660	151 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	BIRC3	Q13489	604 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	NCOA4	Q13772	614 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ZNF699	Q32M78	642 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ZACN	Q401N2	412 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ARHGAP29	Q52LW3	1261 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	TDRD10	Q5VZ19	366 aa	Known RBP	13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	SCARA3	Q6AZY7	606 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	YAF2	Q8IY57	180 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	CELF5	Q8N6W0	485 aa	Known RBP	13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ENGASE	Q8NFI3	743 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	SPATA20	Q8TB22	786 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	GIPC2	Q8TF65	315 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	MRPS31	Q92665	395 aa	Known RBP	13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	FAXDC2	Q96IV6	333 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	FAM84A	Q96KN4	292 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	IER2	Q9BTL4	223 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	BCO2	Q9BYV7	579 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	GDPD2	Q9HCC8	539 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	LTB4R2	Q9NPC1	389 aa		13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	THG1L	Q9NWX6	298 aa	Known RBP	13.45	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708		H0Y858	1186 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ARNTL	O00327	626 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	TRIM66	O15016	1216 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	KRT13	P13646	458 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	TRIM21	P19474	475 aa	Known RBP	13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	LMO2	P25791	158 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	GDI1	P31150	447 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	GTF2H1	P32780	548 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PSMC2	P35998	433 aa	Known RBP	13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	AVPR1A	P37288	418 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PPP1R2	P41236	205 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	NBL1	P41271	181 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PPP3CC	P48454	512 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	VAMP7	P51809	220 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ZNF268	Q14587	947 aa	Predicted RBP	13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ZCWPW2	Q504Y3	356 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ZNF667	Q5HYK9	610 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	CEP135	Q66GS9	1140 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	TPRG1	Q6ZUI0	275 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	MON1A	Q86VX9	555 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	CMTM8	Q8IZV2	173 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	OR6B3	Q8NGW1	331 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PLEKHO2	Q8TD55	490 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	CLDN23	Q96B33	292 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	TNIP3	Q96KP6	325 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	C8orf48	Q96LL4	319 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ELOVL4	Q9GZR5	314 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	SEMA4A	Q9H3S1	761 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	CRTAC1	Q9NQ79	661 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	F5	P12259	2224 aa		13.44	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ATP8B3	O60423	1300 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	DENND4C	Q5VZ89	1909 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	FAM170B	A6NMN3	283 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	SLC38A8	A6NNN8	435 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708		A8MXQ7	604 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	STX10	O60499	249 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PTPN1	P18031	435 aa	Known RBP	13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ANXA13	P27216	316 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	CASP4	P49662	377 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	MRE11	P49959	708 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	NOP14	P78316	857 aa	Known RBP	13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ADAM9	Q13443	819 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	GRM2	Q14416	872 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ANGPT1	Q15389	498 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	DDR2	Q16832	855 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	MAMSTR	Q6ZN01	415 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	SV2A	Q7L0J3	742 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	TMEM150A	Q86TG1	271 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	KIAA1958	Q8N8K9	716 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	BPIFB1	Q8TDL5	484 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	CSGALNACT1	Q8TDX6	532 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	MYLPF	Q96A32	169 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PCED1B	Q96HM7	432 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	MRPL45	Q9BRJ2	306 aa	Known RBP	13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	SLC46A2	Q9BY10	475 aa		13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms