RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CASTOR2A6NHX0 329 aa20.65■□□□□ 0.9
CLN6-205ENST00000564846 PYGMP11217 842 aa20.65■□□□□ 0.9
CLN6-205ENST00000564846 HSPA6P17066 643 aa20.65■□□□□ 0.9
CLN6-205ENST00000564846 IBSPP21815 317 aaPredicted RBP20.65■□□□□ 0.9
CLN6-205ENST00000564846 AARSP49588 968 aaKnown RBP eCLIP20.65■□□□□ 0.9
CLN6-205ENST00000564846 TUSC3Q13454 348 aa20.65■□□□□ 0.9
CLN6-205ENST00000564846 WSCD1Q658N2 575 aa20.65■□□□□ 0.9
CLN6-205ENST00000564846 GLB1LQ6UWU2 654 aa20.65■□□□□ 0.9
CLN6-205ENST00000564846 ANKRD52Q8NB46 1076 aa20.65■□□□□ 0.9
CLN6-205ENST00000564846 FNIP1Q8TF40 1166 aa20.65■□□□□ 0.9
CLN6-205ENST00000564846 TJP2Q9UDY2 1190 aa20.65■□□□□ 0.9
CLN6-205ENST00000564846 GOLGA6L10A0A0M3HER8 536 aa20.64■□□□□ 0.9
CLN6-205ENST00000564846 GOLGA8SH3BPF8 625 aa20.64■□□□□ 0.9
CLN6-205ENST00000564846 LHX1P48742 406 aa20.64■□□□□ 0.9
CLN6-205ENST00000564846 PPP2R5EQ16537 467 aa20.64■□□□□ 0.9
CLN6-205ENST00000564846 TMCO3Q6UWJ1 677 aa20.64■□□□□ 0.9
CLN6-205ENST00000564846 DSTYKQ6XUX3 929 aa20.64■□□□□ 0.9
CLN6-205ENST00000564846 OSTM1Q86WC4 334 aa20.64■□□□□ 0.9
CLN6-205ENST00000564846 SLC35F5Q8WV83 523 aa20.64■□□□□ 0.9
CLN6-205ENST00000564846 HNRNPLLQ8WVV9 542 aaKnown RBP20.64■□□□□ 0.9
CLN6-205ENST00000564846 LINC01599Q8WXQ3 324 aa20.64■□□□□ 0.9
CLN6-205ENST00000564846 KRT12Q99456 494 aa20.64■□□□□ 0.9
CLN6-205ENST00000564846 AP1M1Q9BXS5 423 aa20.64■□□□□ 0.9
CLN6-205ENST00000564846 SLC4A5Q9BY07 1137 aa20.64■□□□□ 0.9
CLN6-205ENST00000564846 ST7Q9NRC1 585 aa20.64■□□□□ 0.9
CLN6-205ENST00000564846 CACNG4Q9UBN1 327 aa20.64■□□□□ 0.9
CLN6-205ENST00000564846 INPP5FQ9Y2H2 1132 aa20.64■□□□□ 0.9
CLN6-205ENST00000564846 HCRTO43612 131 aa20.64■□□□□ 0.89
CLN6-205ENST00000564846 ERLIN1O75477 346 aa20.64■□□□□ 0.89
CLN6-205ENST00000564846 COL6A1P12109 1028 aa20.64■□□□□ 0.89
CLN6-205ENST00000564846 BCAT1P54687 386 aa20.64■□□□□ 0.89
CLN6-205ENST00000564846 VSNL1P62760 191 aa20.64■□□□□ 0.89
CLN6-205ENST00000564846 B3GALNT2Q8NCR0 500 aa20.64■□□□□ 0.89
CLN6-205ENST00000564846 USTQ9Y2C2 406 aa20.64■□□□□ 0.89
CLN6-205ENST00000564846 B3GAT3O94766 335 aa20.63■□□□□ 0.89
CLN6-205ENST00000564846 RFC1P35251 1148 aaPredicted RBP20.63■□□□□ 0.89
CLN6-205ENST00000564846 ZNF252P-AS1Q0IIN9 211 aa20.63■□□□□ 0.89
CLN6-205ENST00000564846 BST2Q10589 180 aaKnown RBP20.63■□□□□ 0.89
CLN6-205ENST00000564846 LRRC38Q5VT99 294 aa20.63■□□□□ 0.89
CLN6-205ENST00000564846 PMF1Q6P1K2 205 aa20.63■□□□□ 0.89
CLN6-205ENST00000564846 TMEM110Q86TL2 294 aa20.63■□□□□ 0.89
CLN6-205ENST00000564846 C3orf58Q8NDZ4 430 aa20.63■□□□□ 0.89
CLN6-205ENST00000564846 SPATA18Q8TC71 538 aa20.63■□□□□ 0.89
CLN6-205ENST00000564846 E5RJQ4 531 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 PQBP1O60828 265 aaKnown RBP20.62■□□□□ 0.89
CLN6-205ENST00000564846 NBNO60934 754 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 CCDC130P13994 396 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 IGFBP6P24592 240 aaPredicted RBP20.62■□□□□ 0.89
CLN6-205ENST00000564846 OGDHQ02218 1023 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 PDE4CQ08493 712 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 PLEKHG4Q58EX7 1191 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 ANKRD33Q7Z3H0 272 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 ZDHHC17Q8IUH5 632 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 KLHL7Q8IXQ5 586 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 HNRNPABQ99729 332 aaKnown RBP20.62■□□□□ 0.89
CLN6-205ENST00000564846 PAAF1Q9BRP4 392 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 CRISPLD2Q9H0B8 497 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 SLITRK6Q9H5Y7 841 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 ARFGAP3Q9NP61 516 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 CYLDQ9NQC7 956 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 METTL5Q9NRN9 209 aaKnown RBP20.62■□□□□ 0.89
CLN6-205ENST00000564846 STIM2Q9P246 746 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 ODC1P11926 461 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 PTPN1P18031 435 aaKnown RBP20.62■□□□□ 0.89
CLN6-205ENST00000564846 PSMA2P25787 234 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 SSR1P43307 286 aaKnown RBP20.62■□□□□ 0.89
CLN6-205ENST00000564846 FAM102AQ5T9C2 384 aaPredicted RBP20.62■□□□□ 0.89
CLN6-205ENST00000564846 AADACL2Q6P093 401 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 CC2D1AQ6P1N0 951 aaPredicted RBP20.62■□□□□ 0.89
CLN6-205ENST00000564846 SLC13A5Q86YT5 568 aaPredicted RBP20.62■□□□□ 0.89
CLN6-205ENST00000564846 KATNAL2Q8IYT4 538 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 JOSD2Q8TAC2 188 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 URGCPQ8TCY9 931 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 SLC2A14Q8TDB8 520 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 SEPT8Q92599 483 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 APBB2Q92870 758 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 LPIN3Q9BQK8 851 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 ELAC1Q9H777 363 aaKnown RBP20.62■□□□□ 0.89
CLN6-205ENST00000564846 TMEM161AQ9NX61 479 aa20.62■□□□□ 0.89
CLN6-205ENST00000564846 DDX43Q9NXZ2 648 aaKnown RBP20.62■□□□□ 0.89
CLN6-205ENST00000564846 ADORA2BP29275 332 aa20.61■□□□□ 0.89
CLN6-205ENST00000564846 TAS2R40P59535 323 aa20.61■□□□□ 0.89
CLN6-205ENST00000564846 GPNMBQ14956 572 aa20.61■□□□□ 0.89
CLN6-205ENST00000564846 ACAP1Q15027 740 aa20.61■□□□□ 0.89
CLN6-205ENST00000564846 TIGD5Q53EQ6 642 aa20.61■□□□□ 0.89
CLN6-205ENST00000564846 OR6B2Q6IFH4 312 aa20.61■□□□□ 0.89
CLN6-205ENST00000564846 DCLRE1AQ6PJP8 1040 aa20.61■□□□□ 0.89
CLN6-205ENST00000564846 SLC39A5Q6ZMH5 540 aa20.61■□□□□ 0.89
CLN6-205ENST00000564846 HDAC7Q8WUI4 952 aa20.61■□□□□ 0.89
CLN6-205ENST00000564846 KANSL3Q9P2N6 904 aa20.61■□□□□ 0.89
CLN6-205ENST00000564846 DMGDHQ9UI17 866 aaKnown RBP20.61■□□□□ 0.89
CLN6-205ENST00000564846 MTUS1Q9ULD2 1270 aa20.61■□□□□ 0.89
CLN6-205ENST00000564846 ARHGEF37A1IGU5 675 aa20.6■□□□□ 0.89
CLN6-205ENST00000564846 F8VP50 259 aa20.6■□□□□ 0.89
CLN6-205ENST00000564846 SART1O43290 800 aaKnown RBP20.6■□□□□ 0.89
CLN6-205ENST00000564846 RPL34P49207 117 aaKnown RBP20.6■□□□□ 0.89
CLN6-205ENST00000564846 RGS7P49802 495 aa20.6■□□□□ 0.89
CLN6-205ENST00000564846 SLC8A3P57103 927 aa20.6■□□□□ 0.89
CLN6-205ENST00000564846 NOMO2Q5JPE7 1267 aa20.6■□□□□ 0.89
CLN6-205ENST00000564846 FAM183BPQ6ZVS7 135 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms