RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 HERC6Q8IVU3 1022 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 PPTC7Q8NI37 304 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 ACSF2Q96CM8 615 aaPredicted RBP12.75□□□□□ -0.37
NR4A1-215ENST00000550557 INTS9Q9NV88 658 aaKnown RBP12.75□□□□□ -0.37
NR4A1-215ENST00000550557 UVRAGQ9P2Y5 699 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 C5P01031 1676 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 ESYT3A0FGR9 886 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 MOXD2PA6NHM9 499 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 PIK3CDO00329 1044 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 STX1BP61266 288 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 TMC2Q8TDI7 906 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 APOL5Q9BWW9 433 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 ANKZF1Q9H8Y5 726 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 DNAJC17Q9NVM6 304 aaKnown RBP12.75□□□□□ -0.37
NR4A1-215ENST00000550557 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.75□□□□□ -0.37
NR4A1-215ENST00000550557 CNTNAP2Q9UHC6 1331 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 EXOC1LA0A1B0GW35 172 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 H3BQF6 201 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 RALBP11234 206 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 ACAT1P24752 427 aaKnown RBP12.75□□□□□ -0.37
NR4A1-215ENST00000550557 ETFBP38117 255 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 CASP4P49662 377 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 SYTL3Q4VX76 610 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 WDR93Q6P2C0 686 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 ULK4Q96C45 1275 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 RNPEPQ9H4A4 650 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 FIS1Q9Y3D6 152 aa12.75□□□□□ -0.37
NR4A1-215ENST00000550557 FBXO21O94952 628 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 SP100P23497 879 aaPredicted RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 PABPC1LQ4VXU2 614 aaKnown RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 MEI1Q5TIA1 1274 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 LLGL2Q6P1M3 1020 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 RBM23Q86U06 439 aaKnown RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 C1orf131Q8NDD1 294 aaKnown RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 AGAP3Q96P47 875 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 XPO6Q96QU8 1125 aaKnown RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 TLE6Q9H808 572 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 RAB23Q9ULC3 237 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 ALS2Q96Q42 1657 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 TRPM3Q9HCF6 1732 aaPredicted RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 LRRC10BA6NIK2 292 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 ATP9BO43861 1147 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 LZTS3O60299 673 aaPredicted RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 ESRRBO95718 433 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 TAC1P20366 129 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 EIF3BP55884 814 aaKnown RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 EIF3EP60228 445 aaKnown RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 PCBP1Q15365 356 aaKnown RBP eCLIP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 ABRAQ8N0Z2 381 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 SPATA20Q8TB22 786 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 BTBD7Q9P203 1132 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 VPS28Q9UK41 221 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 BAG5Q9UL15 447 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 L1RE1Q9UN81 338 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 LUC7L3O95232 432 aaKnown RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 CYP24A1Q07973 514 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 NOL9Q5SY16 702 aaKnown RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 NT5DC4Q86YG4 428 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 KIAA0319LQ8IZA0 1049 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 SEMA6BQ9H3T3 888 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 C11orf49Q9H6J7 331 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 INTS13Q9NVM9 706 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 ARHGAP42A6NI28 874 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 EML1O00423 815 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 NVLO15381 856 aaKnown RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 ARMC6Q6NXE6 501 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 TRIM67Q6ZTA4 783 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 IL31RAQ8NI17 732 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 TTC8Q8TAM2 541 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 RAPGEF5Q92565 580 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 SYN2Q92777 582 aaPredicted RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 TNFRSF25Q93038 417 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 FMO2Q99518 471 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 CINPQ9BW66 212 aaPredicted RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 GPR63Q9BZJ6 419 aa12.74□□□□□ -0.37
NR4A1-215ENST00000550557 METTL5Q9NRN9 209 aaKnown RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 TSR3Q9UJK0 312 aaKnown RBP12.74□□□□□ -0.37
NR4A1-215ENST00000550557 SASH3O75995 380 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 KRT37O76014 449 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 YWHAQP27348 245 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 PMS1P54277 932 aaKnown RBP12.73□□□□□ -0.37
NR4A1-215ENST00000550557 TMED2Q15363 201 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 SLC39A12Q504Y0 691 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 FOPNLQ96NB1 174 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 SAYSD1Q9NPB0 183 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 KLHL11Q9NVR0 708 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 STK38LQ9Y2H1 464 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 LOC102724159A0A0B4J2E5 919 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 GOLGA8MH3BSY2 632 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 ZNF197O14709 1029 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 PEX10O60683 326 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 PWP2Q15269 919 aaKnown RBP12.73□□□□□ -0.37
NR4A1-215ENST00000550557 SHROOM1Q2M3G4 852 aaPredicted RBP12.73□□□□□ -0.37
NR4A1-215ENST00000550557 USP41Q3LFD5 358 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 LRRC8DQ7L1W4 858 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 LRRC8CQ8TDW0 803 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 GIPC2Q8TF65 315 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 ATP6V1G3Q96LB4 118 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 RIPK3Q9Y572 518 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 KPNA7A9QM74 516 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms