RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 HUS1O60921 280 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 ATG13O75143 517 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 NOL4O94818 638 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 CCDC192P0DO97 292 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 RAP1GAPP47736 663 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 ZNF268Q14587 947 aaPredicted RBP16.56■□□□□ 0.24
RAB5C-205ENST00000550013 PDGFRLQ15198 375 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 INTS6LQ5JSJ4 861 aaKnown RBP16.56■□□□□ 0.24
RAB5C-205ENST00000550013 CXorf38Q8TB03 319 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 CLIC6Q96NY7 704 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 HHIPQ96QV1 700 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 CYP2S1Q96SQ9 504 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 ACBD6Q9BR61 282 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 FGFBP2Q9BYJ0 223 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 SMOC1Q9H4F8 434 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 TRPC7Q9HCX4 862 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 ABCB6Q9NP58 842 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 RBAKQ9NYW8 714 aaPredicted RBP16.56■□□□□ 0.24
RAB5C-205ENST00000550013 SEL1LQ9UBV2 794 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 FBXO2Q9UK22 296 aaPredicted RBP16.56■□□□□ 0.24
RAB5C-205ENST00000550013 GTF3C4Q9UKN8 822 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 EXOC7Q9UPT5 735 aa16.56■□□□□ 0.24
RAB5C-205ENST00000550013 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.56■□□□□ 0.24
RAB5C-205ENST00000550013 HELZP42694 1942 aaKnown RBP16.56■□□□□ 0.24
RAB5C-205ENST00000550013 CCDC163A0A0D9SF12 145 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 VPS37CA5D8V6 355 aaPredicted RBP16.55■□□□□ 0.24
RAB5C-205ENST00000550013 SOBPA7XYQ1 873 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 GCNT3O95395 438 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 ZNF806P0C7X5 589 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 GAP43P17677 238 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 GJA4P35212 333 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 RPL10AP62906 217 aaKnown RBP16.55■□□□□ 0.24
RAB5C-205ENST00000550013 MYL7Q01449 175 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 MTF1Q14872 753 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 RRAGBQ5VZM2 374 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 IL31Q6EBC2 164 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 CSGALNACT2Q8N6G5 542 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 C12orf50Q8NA57 414 aaPredicted RBP16.55■□□□□ 0.24
RAB5C-205ENST00000550013 NOC3LQ8WTT2 800 aaKnown RBP16.55■□□□□ 0.24
RAB5C-205ENST00000550013 EZH1Q92800 747 aaPredicted RBP16.55■□□□□ 0.24
RAB5C-205ENST00000550013 TRMT2BQ96GJ1 504 aaKnown RBP16.55■□□□□ 0.24
RAB5C-205ENST00000550013 LOXL4Q96JB6 756 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 P2RY13Q9BPV8 354 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 CBWD1Q9BRT8 395 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 UXTQ9UBK9 157 aaPredicted RBP16.55■□□□□ 0.24
RAB5C-205ENST00000550013 CCDC39Q9UFE4 941 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 SIX4Q9UIU6 781 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 SNX9Q9Y5X1 595 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 WNT6Q9Y6F9 365 aa16.55■□□□□ 0.24
RAB5C-205ENST00000550013 KRT19P08727 400 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 DRD1P21728 446 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 AMPD2Q01433 879 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 FAM160A1Q05DH4 1040 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 USP4Q13107 963 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 ZNF77Q15935 545 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 SV2BQ7L1I2 683 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 ADGRF2Q8IZF7 708 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 SYCP3Q8IZU3 236 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 TMEM86AQ8N2M4 240 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 CPA6Q8N4T0 437 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 LRRC52Q8N7C0 313 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 RPLP0P6Q8NHW5 317 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 CACTINQ8WUQ7 758 aaKnown RBP16.54■□□□□ 0.24
RAB5C-205ENST00000550013 MYRFLQ96LU7 910 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 MTMR12Q9C0I1 747 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 PCIF1Q9H4Z3 704 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 ECT2Q9H8V3 914 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 PDE11AQ9HCR9 933 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 DUS2Q9NX74 493 aaKnown RBP16.54■□□□□ 0.24
RAB5C-205ENST00000550013 GDAP2Q9NXN4 497 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 ITGA11Q9UKX5 1188 aa16.54■□□□□ 0.24
RAB5C-205ENST00000550013 CEP295Q9C0D2 2601 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 PTPRDP23468 1912 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 TRAV19A0A0A6YYK7 116 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 C2orf78A6NCI8 922 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 TM4SF5O14894 197 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 ATP2C2O75185 946 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 AKAP3O75969 853 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 CKMP06732 381 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 USP17L7P0C7H9 530 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 IDEP14735 1019 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 GARTP22102 1010 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 IFNAR2P48551 515 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 LIMK1P53667 647 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 ST3GAL2Q16842 350 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 SOWAHAQ2M3V2 549 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 PLK5Q496M5 336 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 PLA2G2CQ5R387 149 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 STPG1Q5TH74 334 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 LMBRD2Q68DH5 695 aaPredicted RBP16.53■□□□□ 0.24
RAB5C-205ENST00000550013 FAM173BQ6P4H8 233 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 SPATA2LQ8IUW3 424 aaPredicted RBP16.53■□□□□ 0.24
RAB5C-205ENST00000550013 SCN4BQ8IWT1 228 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 CAMKK1Q8N5S9 505 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 ARL14EPQ8N8R7 260 aaPredicted RBP16.53■□□□□ 0.24
RAB5C-205ENST00000550013 OSCP1Q8WVF1 389 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 TMEM206Q9H813 350 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 OLFML3Q9NRN5 406 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 GCNT4Q9P109 453 aa16.53■□□□□ 0.24
RAB5C-205ENST00000550013 PCDHB13Q9Y5F0 798 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms