RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CYP26C1Q6V0L0 522 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 TAS1R1Q7RTX1 841 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 RBBP8NLQ8NC74 664 aaPredicted RBP13.06□□□□□ -0.32
SCARB1-204ENST00000535005 OR6B3Q8NGW1 331 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 RTP3Q9BQQ7 232 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 C17orf80Q9BSJ5 609 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 DESI2Q9BSY9 194 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 TTPALQ9BTX7 342 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 NT5C1AQ9BXI3 368 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 OXCT2Q9BYC2 517 aaPredicted RBP13.06□□□□□ -0.32
SCARB1-204ENST00000535005 ELOVL4Q9GZR5 314 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 DNAI2Q9GZS0 605 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 ABHD10Q9NUJ1 306 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 KIAA1257Q9ULG3 409 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 KIAA1671Q9BY89 1806 aa13.06□□□□□ -0.32
SCARB1-204ENST00000535005 SOWAHDA6NJG2 315 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 A8MXQ7 604 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 CYP26A1O43174 497 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 TBC1D4O60343 1298 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 GFPT2O94808 682 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 KRT5P13647 590 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 PCSK1P29120 753 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 AMPD2Q01433 879 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 MEA1Q16626 185 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 TSR1Q2NL82 804 aaKnown RBP13.05□□□□□ -0.32
SCARB1-204ENST00000535005 VARS2Q5ST30 1063 aaKnown RBP13.05□□□□□ -0.32
SCARB1-204ENST00000535005 LRRC31Q6UY01 552 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 THEM5Q8N1Q8 247 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 SLC4A11Q8NBS3 891 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 PIK3R5Q8WYR1 880 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 TMEM176AQ96HP8 235 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 TWNKQ96RR1 684 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 ACBD6Q9BR61 282 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 LZTFL1Q9NQ48 299 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 DDX43Q9NXZ2 648 aaKnown RBP13.05□□□□□ -0.32
SCARB1-204ENST00000535005 HMGXB4Q9UGU5 601 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 PUF60Q9UHX1 559 aaKnown RBP13.05□□□□□ -0.32
SCARB1-204ENST00000535005 JRKLQ9Y4A0 524 aa13.05□□□□□ -0.32
SCARB1-204ENST00000535005 ATXN2Q99700 1313 aaKnown RBP13.05□□□□□ -0.32
SCARB1-204ENST00000535005 H7C4K7 107 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 SHOX2O60902 331 aaPredicted RBP13.04□□□□□ -0.32
SCARB1-204ENST00000535005 LMO2P25791 158 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 USP8P40818 1118 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 VSNL1P62760 191 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 CDK17Q00537 523 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 DSG1Q02413 1049 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 PTK2Q05397 1052 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 ASIC2Q16515 512 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 LRIT3Q3SXY7 679 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 RTP2Q5QGT7 225 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 SWT1Q5T5J6 900 aaKnown RBP13.04□□□□□ -0.32
SCARB1-204ENST00000535005 KIAA0319Q5VV43 1072 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 ANKS3Q6ZW76 656 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 LNX1Q8TBB1 728 aaPredicted RBP13.04□□□□□ -0.32
SCARB1-204ENST00000535005 TNIP3Q96KP6 325 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 C11orf84Q9BUA3 381 aaPredicted RBP13.04□□□□□ -0.32
SCARB1-204ENST00000535005 DEF6Q9H4E7 631 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 ZNHIT6Q9NWK9 470 aaKnown RBP13.04□□□□□ -0.32
SCARB1-204ENST00000535005 CDH9Q9ULB4 789 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 BACE2Q9Y5Z0 518 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 BZW2Q9Y6E2 419 aaKnown RBP13.04□□□□□ -0.32
SCARB1-204ENST00000535005 CHD9Q3L8U1 2897 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 OR6C75A6NL08 312 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 GLUD2P49448 558 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 GYS2P54840 703 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 HGSNATQ68CP4 663 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 ZNF280DQ6N043 979 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 WDR59Q6PJI9 974 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 CEP57Q86XR8 500 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 VPS52Q8N1B4 723 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 SLC35F6Q8N357 371 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 SPPL3Q8TCT6 385 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 ZBP1Q9H171 429 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 NKX2-4Q9H2Z4 354 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 MTRRQ9UBK8 725 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 SSX2IPQ9Y2D8 614 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 GBF1Q92538 1859 aa13.04□□□□□ -0.32
SCARB1-204ENST00000535005 LAMA2P24043 3122 aaKnown RBP13.03□□□□□ -0.32
SCARB1-204ENST00000535005 TSC2P49815 1807 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 LILRB3O75022 631 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 SERPING1P05155 500 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 PDGFRBP09619 1106 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 CTSAP10619 480 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 VDRP11473 427 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 CYP11B1P15538 503 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 PTPN1P18031 435 aaKnown RBP13.03□□□□□ -0.32
SCARB1-204ENST00000535005 DNAJB2P25686 324 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 ZNF394Q53GI3 561 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 FAM171BQ6P995 826 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 ZNF677Q86XU0 584 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 EPS8L1Q8TE68 723 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 B3GALT6Q96L58 329 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 PKMYT1Q99640 499 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 SYT15Q9BQS2 421 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 SYT11Q9BT88 431 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 HAUS4Q9H6D7 363 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 FAM204AQ9H8W3 233 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 SLC28A3Q9HAS3 691 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 RXFP1Q9HBX9 757 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 NOCTQ9UK39 431 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms