RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PIGHQ14442 188 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-214ENST00000495485 ZNF268Q14587 947 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-214ENST00000495485 C9orf57Q5W0N0 161 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 PLEKHA7Q6IQ23 1121 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 DNAJC24Q6P3W2 148 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 DCUN1D2Q6PH85 259 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 MAATS1Q7Z4T9 603 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 ECHDC2Q86YB7 292 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 ABI1Q8IZP0 508 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 CRIPAKQ8N1N5 446 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 APPL2Q8NEU8 664 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 FEZF2Q8TBJ5 459 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 SP7Q8TDD2 431 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-214ENST00000495485 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.85□□□□□ -0.671e-6■■■■■ 56.2
HDAC3-214ENST00000495485 TSC1Q92574 1164 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 TNIP3Q96KP6 325 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 YME1L1Q96TA2 773 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 PSMB7Q99436 277 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 NCAPGQ9BPX3 1015 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 RHOXF2Q9BQY4 288 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 C11orf70Q9BRQ4 267 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 NXF3Q9H4D5 531 aaKnown RBP10.85□□□□□ -0.67
HDAC3-214ENST00000495485 ACP6Q9NPH0 428 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 GDAP2Q9NXN4 497 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 RAB21Q9UL25 225 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 POLIQ9UNA4 740 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 PACSIN2Q9UNF0 486 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-214ENST00000495485 SNX9Q9Y5X1 595 aa10.85□□□□□ -0.67
HDAC3-214ENST00000495485 KPNA7A9QM74 516 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 KRIT1O00522 736 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 PIRO00625 290 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 INPPL1O15357 1258 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 DGKIO75912 1065 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 RB1P06400 928 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 RRM1P23921 792 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 AKAP5P24588 427 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 LRPAP1P30533 357 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 CTNNA1P35221 906 aaKnown RBP10.84□□□□□ -0.67
HDAC3-214ENST00000495485 DNA2P51530 1060 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 NDST1P52848 882 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 GSCP56915 257 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-214ENST00000495485 C2orf54Q08AI8 447 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 NAA30Q147X3 362 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-214ENST00000495485 ACAP1Q15027 740 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 LONRF2Q1L5Z9 754 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 UBXN11Q5T124 520 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 MMS22LQ6ZRQ5 1243 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 ZNF598Q86UK7 904 aaKnown RBP10.84□□□□□ -0.67
HDAC3-214ENST00000495485 RTN4RL1Q86UN2 441 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-214ENST00000495485 DNAAF5Q86Y56 855 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 PASD1Q8IV76 773 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 RHOT1Q8IXI2 618 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 IFT20Q8IY31 132 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 TOP6BLQ8N6T0 577 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 SLC4A11Q8NBS3 891 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 C3orf20Q8ND61 904 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 LRRN4CLQ8ND94 238 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 OR6B3Q8NGW1 331 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 CXorf38Q8TB03 319 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 ELMO3Q96BJ8 720 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 TIFAQ96CG3 184 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 ZNF689Q96CS4 500 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-214ENST00000495485 C18orf8Q96DM3 657 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 DDX27Q96GQ7 796 aaKnown RBP10.84□□□□□ -0.67
HDAC3-214ENST00000495485 FAM84AQ96KN4 292 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 ZSWIM1Q9BR11 485 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 SLITRK6Q9H5Y7 841 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 SMYD3Q9H7B4 428 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 SLC28A3Q9HAS3 691 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 RC3H2Q9HBD1 1191 aaKnown RBP10.84□□□□□ -0.67
HDAC3-214ENST00000495485 AAASQ9NRG9 546 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 HOMER3Q9NSC5 361 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.84□□□□□ -0.67
HDAC3-214ENST00000495485 COG5Q9UP83 839 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 PCDHA3Q9Y5H8 950 aa10.84□□□□□ -0.67
HDAC3-214ENST00000495485 A8MXQ7 604 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 DDX3YO15523 660 aaKnown RBP10.83□□□□□ -0.68
HDAC3-214ENST00000495485 PSTPIP1O43586 416 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 MGEA5O60502 916 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 PROSCO94903 275 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 DNAJB2P25686 324 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 GNL1P36915 607 aaPredicted RBP10.83□□□□□ -0.68
HDAC3-214ENST00000495485 CDH8P55286 799 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 DEFB103AP81534 67 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 PTP4A2Q12974 167 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 MAMLD1Q13495 774 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 HADHQ16836 314 aaKnown RBP10.83□□□□□ -0.68
HDAC3-214ENST00000495485 FBXO38Q6PIJ6 1188 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 LCLAT1Q6UWP7 414 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 GLB1LQ6UWU2 654 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.83□□□□□ -0.68
HDAC3-214ENST00000495485 ZDHHC17Q8IUH5 632 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 TMEM86AQ8N2M4 240 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 LRRC43Q8N309 656 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 FIBCD1Q8N539 461 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 SMG8Q8ND04 991 aaKnown RBP10.83□□□□□ -0.68
HDAC3-214ENST00000495485 C1orf131Q8NDD1 294 aaKnown RBP10.83□□□□□ -0.68
HDAC3-214ENST00000495485 SPATA18Q8TC71 538 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 URGCPQ8TCY9 931 aa10.83□□□□□ -0.68
HDAC3-214ENST00000495485 LINC01599Q8WXQ3 324 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms